RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PRRG4Q9BZD6 226 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 PLEKHA6Q9Y2H5 1048 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 EP300Q09472 2414 aaPredicted RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 PLSCR5A0PG75 271 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 M0R233 179 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 ANGPTL7O43827 346 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 NME2P1O60361 137 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 CXCL2P19875 107 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 NME2P22392 152 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 PCBD1P61457 104 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 ZNF92Q03936 586 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 ARFRP1Q13795 201 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 MICBQ29980 383 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 NHLRC3Q5JS37 347 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 ELP2Q6IA86 826 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 DPPA2Q7Z7J5 298 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 RNASE11Q8TAA1 199 aaKnown RBP12.91□□□□□ -0.34
PRNP-201ENST00000379440 TCEAL7Q9BRU2 100 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
PRNP-201ENST00000379440 IGKV1-27A0A075B6S5 117 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 F5H5P2 479 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 SPRY1O43609 319 aaPredicted RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 FARS2O95363 451 aaKnown RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 IFNA6P05013 189 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 TMEM225BP0DP42 221 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 KCNJ3P48549 501 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 OR2B11Q5JQS5 317 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 NAXEQ8NCW5 288 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 FN3KRPQ9HA64 309 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 ZNF230Q9UIE0 474 aaPredicted RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 KLF13Q9Y2Y9 288 aaPredicted RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 KMT2EQ8IZD2 1858 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 FOXI3A8MTJ6 420 aaPredicted RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 KLRC4-KLRK1H3BQV0 150 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 NDUFB7P17568 137 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 HSD17B13Q7Z5P4 300 aaPredicted RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 VASH2Q86V25 355 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 CA5BP1Q8WTZ4 195 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 MAFIPQ8WZ33 124 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 ST6GALNAC5Q9BVH7 336 aa12.9□□□□□ -0.34
PRNP-201ENST00000379440 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
PRNP-201ENST00000379440 ZNF587BE7ETH6 402 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 HLA-AP01891 365 aaKnown RBP12.89□□□□□ -0.35
PRNP-201ENST00000379440 FAM3AP98173 230 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 DEFA5Q01523 94 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 RNF212Q495C1 297 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 C9orf152Q5JTZ5 239 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 ADAD2Q8NCV1 583 aaKnown RBP12.89□□□□□ -0.35
PRNP-201ENST00000379440 CCDC54Q8NEL0 328 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 LRRC46Q96FV0 321 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 CSAG2Q9Y5P2 127 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 OTOGLQ3ZCN5 2332 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 HLA-HP01893 362 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 CCL2P13500 99 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 GABRR1P24046 479 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 MPZP25189 248 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 EIF4E3Q8N5X7 224 aaKnown RBP12.89□□□□□ -0.35
PRNP-201ENST00000379440 CXorf58Q96LI9 332 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 NEU1Q99519 415 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 PECRQ9BY49 303 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
PRNP-201ENST00000379440 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
PRNP-201ENST00000379440 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 DMRT1Q9Y5R6 373 aa12.89□□□□□ -0.35
PRNP-201ENST00000379440 ZNF503-AS2A6NEH8 195 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 LY86O95711 162 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 FTH1P19P0C7X4 201 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 CCNOP22674 350 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
PRNP-201ENST00000379440 DHODHQ02127 395 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 SLC10A1Q14973 349 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 FAM189A2Q15884 450 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 RBMS3Q6XE24 437 aaKnown RBP12.88□□□□□ -0.35
PRNP-201ENST00000379440 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 STEAP2Q8NFT2 490 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
PRNP-201ENST00000379440 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 ANAPC10Q9UM13 185 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 hCG_38984A0A1B0GV85 526 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 DHRS7CA6NNS2 312 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 MCRIP1C9JLW8 97 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 ARPC5O15511 151 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 NKX2-8O15522 239 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 NRASP01111 189 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 CD46P15529 392 aa12.88□□□□□ -0.35
PRNP-201ENST00000379440 AKR1C4P17516 323 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms