RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 NEIL1Q96FI4 390 aaPredicted RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 FAHD2AQ96GK7 314 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF716A6NP11 495 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 SPINT1O43278 529 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 LANCL1O43813 399 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OPN1MWP04001 364 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 PRR35P0CG20 571 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OPN1MW2P0DN77 364 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OPN1MW3P0DN78 364 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 SPINK2P20155 84 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 KIR2DS2P43631 304 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 KIAA0141Q14154 515 aaPredicted RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 MARC2Q969Z3 335 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 C2orf50Q96LR7 162 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 PCGF1Q9BSM1 259 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 C20orf141Q9NUB4 165 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 RCL1Q9Y2P8 373 aaKnown RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 CDK2AP1O14519 115 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 MPGP29372 298 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 WDR38Q5JTN6 314 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 TMUB1Q9BVT8 246 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 WDR54Q9H977 334 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 A1L4Q6 167 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 NKX2-8O15522 239 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 TBX19O60806 448 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 SEMA7AO75326 666 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OR4E1P0C645 316 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 PTGFRP43088 359 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 LIMK1P53667 647 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 BTG1P62324 171 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 ENDOGQ14249 297 aaKnown RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 H3F3CQ6NXT2 135 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OR13D1Q8NGV5 346 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 OR6X1Q8NH79 312 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 TINAGQ9UJW2 476 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 NTF3P20783 257 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 PRSS12P56730 875 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 MRPS11P82912 194 aaKnown RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 C14orf79Q96F83 325 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 DERL3Q96Q80 235 aa9.7□□□□□ -0.86
LINC00654-201ENST00000379053 FGF20Q9NP95 211 aaPredicted RBP9.7□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF17P17021 662 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 MLF1P58340 268 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 PDZK1IP1Q13113 114 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF141Q15928 474 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ASCL5Q7RTU5 278 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 CDH26Q8IXH8 852 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 CACNA1SQ13698 1873 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 JUNBP17275 347 aaPredicted RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 CALCRP30988 508 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 OR2F1Q13607 317 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 GPNMBQ14956 572 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 FNDC7Q5VTL7 733 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 NECAP1Q8NC96 275 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 OR1L4Q8NGR5 311 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 C2CD4CQ8TF44 421 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF418Q8TF45 676 aaPredicted RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ABHD3Q8WU67 409 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 TMED6Q8WW62 240 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 TRPM3Q9HCF6 1732 aaPredicted RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 HMGCLL1Q8TB92 370 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 GMPPAQ96IJ6 420 aaPredicted RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 OR51I2Q9H344 312 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 TRBV23-1A0A0A0MS06 115 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 S100A8P05109 93 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 LIMS3P0CW19 117 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 LIMS4P0CW20 117 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 OR2B8PP59922 312 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 HIKESHIQ53FT3 197 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 FAHD1Q6P587 224 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 DGAT2L6Q6ZPD8 337 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 OR10Z1Q8NGY1 313 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 VPS25Q9BRG1 176 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 FAAP24Q9BTP7 215 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 SLC25A22Q9H936 323 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 UCK1Q9HA47 277 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 SLC2A8Q9NY64 477 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 TRAPPC4Q9Y296 219 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 IGKV3-7A0A075B6H7 116 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 LYG2Q86SG7 212 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 VSTM2LQ96N03 204 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 C12orf10Q9HB07 376 aa9.69□□□□□ -0.86
LINC00654-201ENST00000379053 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.69□□□□□ -0.86
LINC00654-201ENST00000379053 A0A1W2PQF6 199 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 TCAPO15273 167 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 SBK3P0C264 359 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 HTN1P15515 57 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 DEGS2Q6QHC5 323 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 OR2W3Q7Z3T1 314 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 ARHGAP5-AS1Q96IT6 56 aa9.68□□□□□ -0.86
LINC00654-201ENST00000379053 AUNIPQ9H7T9 357 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms