RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ZNF850A8MQ14 1090 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 RD3LP0DJH9 198 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 PPP1CCP36873 323 aaKnown RBP15.71■□□□□ 0.11
GNE-201ENST00000377902 LTBRP36941 435 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 SUMO3P55854 103 aaPredicted RBP15.71■□□□□ 0.11
GNE-201ENST00000377902 POLR2GP62487 172 aaKnown RBP eCLIP15.71■□□□□ 0.11
GNE-201ENST00000377902 SNAI3Q3KNW1 292 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 NCMAPQ5T1S8 102 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 PLXDC1Q8IUK5 500 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 OR5L1Q8NGL2 311 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 OR11L1Q8NGX0 322 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 OR2AE1Q8NHA4 323 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 TCEAL3Q969E4 200 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 TM2D1Q9BX74 207 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 AK3Q9UIJ7 227 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 B3GALT1Q9Y5Z6 326 aa15.71■□□□□ 0.11
GNE-201ENST00000377902 C2CD4DB7Z1M9 353 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 CLN5O75503 358 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 DHRS3O75911 302 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 PNLIPP16233 465 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 SULT1A1P50225 295 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 GRB2P62993 217 aaKnown RBP15.71■□□□□ 0.1
GNE-201ENST00000377902 HIST3H3Q16695 136 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 RNF212Q495C1 297 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 HAS2Q92819 552 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 OXGR1Q96P68 337 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 C19orf12Q9NSK7 152 aa15.71■□□□□ 0.1
GNE-201ENST00000377902 CD27P26842 260 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 FAM189A2Q15884 450 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 ZNF239Q16600 458 aaKnown RBP15.7■□□□□ 0.1
GNE-201ENST00000377902 SLC16A14Q7RTX9 510 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 TSTD1Q8NFU3 115 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 RTN4IP1Q8WWV3 396 aaPredicted RBP15.7■□□□□ 0.1
GNE-201ENST00000377902 ZNF837Q96EG3 531 aaPredicted RBP15.7■□□□□ 0.1
GNE-201ENST00000377902 SDK2Q58EX2 2172 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 S100A8P05109 93 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 GLP1RP43220 463 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 ALDH3B1P43353 468 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 TMEM187Q14656 261 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 ACER2Q5QJU3 275 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 AKR7LQ8NHP1 331 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 HPSE2Q8WWQ2 592 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 EDARADDQ8WWZ3 215 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 WDR77Q9BQA1 342 aaPredicted RBP15.7■□□□□ 0.1
GNE-201ENST00000377902 ABHD14AQ9BUJ0 271 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 DMDP11532 3685 aa15.7■□□□□ 0.1
GNE-201ENST00000377902 FAM230AA0A1W2PPH8 454 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 GPR37O15354 613 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 EIF1BO60739 113 aaKnown RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 IGLV3-1P01715 115 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 IGHV2-5P01817 119 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 EIF1P41567 113 aaKnown RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 MTCP1P56278 107 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 NSUN5P2Q63ZY6 315 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 TMEM182Q6ZP80 229 aaPredicted RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 BATF2Q8N1L9 274 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 ZNF385AQ96PM9 386 aaKnown RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 CHST5Q9GZS9 411 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 ARV1Q9H2C2 271 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 CHRDQ9H2X0 955 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 E5RGE8 158 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 ETV2O00321 342 aaPredicted RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 DUX1O43812 170 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 ITGA3P26006 1051 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 HNRNPKP61978 463 aaKnown RBP eCLIP15.69■□□□□ 0.1
GNE-201ENST00000377902 ENDOGQ14249 297 aaKnown RBP15.69■□□□□ 0.1
GNE-201ENST00000377902 WDSUB1Q8N9V3 476 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 Q96M66 194 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 BCL2L14Q9BZR8 327 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 PLEKHA2Q9HB19 425 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 NSG2Q9Y328 171 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 PUS1Q9Y606 427 aaKnown RBP eCLIP15.69■□□□□ 0.1
GNE-201ENST00000377902 V9GYS6 101 aa15.69■□□□□ 0.1
GNE-201ENST00000377902 IGKV1-27A0A075B6S5 117 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 CCDC187A0A096LP49 1063 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 CCL20P78556 96 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 OR2M3Q8NG83 312 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 RBM24Q9BX46 236 aaKnown RBP15.68■□□□□ 0.1
GNE-201ENST00000377902 LUZP4Q9P127 313 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 METTL1Q9UBP6 276 aaKnown RBP15.68■□□□□ 0.1
GNE-201ENST00000377902 CCDC85CA6NKD9 419 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 SEC11BP0C7V7 166 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 ZNF728P0DKX0 622 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 SLC35A1P78382 337 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 KCNMB1Q16558 191 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 ABCA11PQ4W5N1 156 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 SLC25A53Q5H9E4 307 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 C5orf24Q7Z6I8 188 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 FAM213BQ8TBF2 198 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 GINS3Q9BRX5 216 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 NAA60Q9H7X0 242 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 MYOTQ9UBF9 498 aa15.68■□□□□ 0.1
GNE-201ENST00000377902 RRP8O43159 456 aaKnown RBP15.67■□□□□ 0.1
GNE-201ENST00000377902 P2RY1P47900 373 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 CSNK1A1P48729 337 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 UCP2P55851 309 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 HMGN3Q15651 99 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 PIGYQ3MUY2 71 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 ZNF565Q8N9K5 539 aa15.67■□□□□ 0.1
GNE-201ENST00000377902 TAAR9Q96RI9 348 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms