RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MAB21L2Q9Y586 359 aa9.54□□□□□ -0.88
SMARCE1-203ENST00000377808 TMEM89A2RUT3 159 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ANKRD65E5RJM6 399 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 H0YAE9 185 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 CLIC3O95833 236 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 PEX2P28328 305 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 PRDX2P32119 198 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ATP1B3P54709 279 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 CAV3P56539 151 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 RAB40BQ12829 278 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 IL24Q13007 206 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 KLRD1Q13241 179 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ALKBH1Q13686 389 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 GALEQ14376 348 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 Q6ZSR3 168 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 SLC25A26Q70HW3 274 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 CD177Q8N6Q3 437 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 KIR3DL3Q8N743 410 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ASCC1Q8N9N2 400 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 OR52I1Q8NGK6 324 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 APH1BQ8WW43 257 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ADAT3Q96EY9 351 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 PELI1Q96FA3 418 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 SDSLQ96GA7 329 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 RDH12Q96NR8 316 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 NRIP2Q9BQI9 281 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 INPP5EQ9NRR6 644 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 ZNF222Q9UK12 451 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 FAM96BQ9Y3D0 163 aa9.53□□□□□ -0.88
SMARCE1-203ENST00000377808 STAB1Q9NY15 2570 aa9.52□□□□□ -0.88
SMARCE1-203ENST00000377808 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 A0A0U1RQK1 487 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 CYB5AP00167 134 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 RNASE1P07998 156 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 PIPP12273 146 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 EEF1B2P24534 225 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 MPZP25189 248 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 AZGP1P25311 298 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 CFPP27918 469 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 RBP2P50120 134 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 GBX2P52951 348 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 SNU13P55769 128 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 MTCP1P56278 107 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 SMN1Q16637 294 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 KLHL22Q53GT1 634 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 AWAT1Q58HT5 328 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 ZNF561Q8N587 486 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 OR4M1Q8NGD0 313 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 OR51A4Q8NGJ6 313 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 OR10AC1Q8NH08 325 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 CNIH3Q8TBE1 160 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 TAF15Q92804 592 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 EMG1Q92979 244 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 RNF166Q96A37 237 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 RFT1Q96AA3 541 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 CEP19Q96LK0 163 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 NEK6Q9HC98 313 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 C19orf12Q9NSK7 152 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 ERVK13-1Q9NX77 482 aa9.52□□□□□ -0.89
SMARCE1-203ENST00000377808 TRBV23-1A0A0A0MS06 115 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 A0A1W2PPH5 198 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 NOS1APO75052 506 aaPredicted RBP9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 PAHP00439 452 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 KNG1P01042 644 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 IGHA1P01876 353 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 ISG15P05161 165 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 CRYBA1P05813 215 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 MELTFP08582 738 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 HKR1P10072 659 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 CALCBP10092 127 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 ATF1P18846 271 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 PRKACBP22694 351 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 CCR9P51686 369 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 RPL31P62899 125 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 COL10A1Q03692 680 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 FOXL1Q12952 345 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 ZNF691Q5VV52 312 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 TTC23Q5W5X9 447 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 FDX2Q6P4F2 183 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 C16orf87Q6PH81 154 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 FIP1L1Q6UN15 594 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 Q6YL49 198 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 LHFPL2Q6ZUX7 228 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 EGFL6Q8IUX8 553 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 SYS1Q8N2H4 156 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 PNKDQ8N490 385 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 Q8N7P7 452 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 OR13C9Q8NGT0 318 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 OR5AK2Q8NH90 309 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 C8orf46Q8TAG6 207 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 SPACA5Q96QH8 159 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 NOX4Q9NPH5 578 aa9.51□□□□□ -0.89
SMARCE1-203ENST00000377808 MTCH1Q9NZJ7 389 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms