RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 NDUFB6O95139 128 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 IGKV1D-16P01601 117 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 FBXW9Q5XUX1 488 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 TMEM38BQ9NVV0 291 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 AQP7O14520 342 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 SULT1A3P0DMM9 295 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 SULT1A4P0DMN0 295 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 DTYMKP23919 212 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 CEACAM6P40199 344 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF770Q6IQ21 691 aaPredicted RBP15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 C20orf196Q8IYI0 205 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 ERGIC1Q969X5 290 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 PINX1Q96BK5 328 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 POM121L2Q96KW2 1035 aa15.81■□□□□ 0.12
CLSTN1-202ENST00000377298 EXOSC2Q13868 293 aaKnown RBP15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 INO80CQ6PI98 192 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 SSX8Q7RTT4 187 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 OR10V1Q8NGI7 309 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 LIN37Q96GY3 246 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 RNF32Q9H0A6 362 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 SIPA1L1O43166 1804 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 C6orf201Q7Z4U5 140 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF485Q8NCK3 441 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 ACTR3CQ9C0K3 210 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 OIP5O43482 229 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 TSPAN2O60636 221 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 NTN1O95631 604 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 HRASP01112 189 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 OR10J4P0C629 311 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 CSF2RBP32927 897 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 MAGT1Q9H0U3 335 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 BPIFB3P59826 476 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 PPP1R1CQ8WVI7 109 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 ANGPTL4Q9BY76 406 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 SAMD10Q9BYL1 202 aa15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 ERRFI1Q9UJM3 462 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-202ENST00000377298 CLEC18AA5D8T8 446 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 OR5G3P0C626 314 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 MAGEB1P43366 347 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 ZP4Q12836 540 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 GLDNQ6ZMI3 551 aaPredicted RBP15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 CLEC18CQ8NCF0 446 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 RNF133Q8WVZ7 376 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 RAB19A4D1S5 217 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 MGST1P10620 155 aaKnown RBP15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 OR6C3Q9NZP0 311 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 FRRS1LQ9P0K9 344 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 MT-ND4LP03901 98 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 HOXD4P09016 255 aaPredicted RBP15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 COX5AP20674 150 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 F2RP25116 425 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 FAM122BQ7Z309 247 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 TMED6Q8WW62 240 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 TRAV38-1A0A0B4J264 116 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 UBE2G1P62253 170 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 AVPI1Q5T686 147 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 ASB5Q8WWX0 329 aa15.79■□□□□ 0.12
CLSTN1-202ENST00000377298 GFRA3O60609 400 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 MNX1P50219 401 aaPredicted RBP15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 ADIRFQ15847 76 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 FBXW5Q969U6 566 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 RPEQ96AT9 228 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 TPPP3Q9BW30 176 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 CENPVL1A0A0U1RR11 272 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 LY86O95711 162 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 CALCRP30988 508 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 OR52B4Q8NGK2 314 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 RFESDQ8TAC1 157 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 TMED3Q9Y3Q3 217 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 PLXNA1Q9UIW2 1896 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 NCBP2LA6PVI3 153 aaKnown RBP15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF724A8MTY0 619 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 PTP4A3O75365 173 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 BAP18Q8IXM2 172 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 PIK3IP1Q96FE7 263 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 MED9Q9NWA0 146 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 KPTNQ9Y664 436 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 PNPP00491 289 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 LTBRP36941 435 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 FOXL2P58012 376 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 HGDQ93099 445 aa15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF230Q9UIE0 474 aaPredicted RBP15.78■□□□□ 0.12
CLSTN1-202ENST00000377298 CDX4O14627 284 aaPredicted RBP15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 STUMQ69YW2 141 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 LYG1Q8N1E2 194 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 SLC26A10Q8NG04 563 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 DHRS9Q9BPW9 319 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 MYO16Q9Y6X6 1858 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 A0A0J9YW62 118 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 OR4C45A6NMZ5 311 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF705FA8MVS1 300 aaPredicted RBP15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF705DP0CH99 300 aaPredicted RBP15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 ZNF705BP0CI00 300 aaPredicted RBP15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 SMIM10L1P0DMW3 83 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 PTHLHP12272 177 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 COL19A1Q14993 1142 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 LHX4Q969G2 390 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 SMIM10Q96HG1 83 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 SLC25A32Q9H2D1 315 aa15.77■□□□□ 0.12
CLSTN1-202ENST00000377298 A0A1W2PQM1 296 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms