RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 LRP3O75074 770 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 SPDEFO95238 335 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 IGKV1D-12P01611 117 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 SLC25A4P12235 298 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 ZNF250P15622 560 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 CAMK2BQ13554 666 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 PIGYQ3MUY2 71 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 CLEC18BQ6UXF7 455 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 SLC51BQ86UW2 128 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 OR51F2Q8NH61 342 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 AK3Q9UIJ7 227 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 FAM186AA6NE01 2351 aa17.5■□□□□ 0.39
VSX1-202ENST00000376709 GEMIN2O14893 280 aaKnown RBP17.49■□□□□ 0.39
VSX1-202ENST00000376709 SFT2D2O95562 160 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 SERPINF1P36955 418 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 ZNF766Q5HY98 468 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 FBXL14Q8N1E6 418 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 PXT1Q8NFP0 134 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 THAP6Q8TBB0 222 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 MARVELD3Q96A59 401 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 CXorf58Q96LI9 332 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 CMSS1Q9BQ75 279 aaKnown RBP17.49■□□□□ 0.39
VSX1-202ENST00000376709 PAPOLGQ9BWT3 736 aaKnown RBP17.49■□□□□ 0.39
VSX1-202ENST00000376709 ZNF581Q9P0T4 197 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 TNFSF18Q9UNG2 199 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 NMBP08949 121 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 GLRA1P23415 457 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 CD82P27701 267 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 NUFIP2Q7Z417 695 aaKnown RBP17.49■□□□□ 0.39
VSX1-202ENST00000376709 MRPS24Q96EL2 167 aaKnown RBP17.49■□□□□ 0.39
VSX1-202ENST00000376709 ANXA10Q9UJ72 324 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 EDARQ9UNE0 448 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 ST3GAL6Q9Y274 331 aa17.49■□□□□ 0.39
VSX1-202ENST00000376709 ZNF503-AS2A6NEH8 195 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 CRYZL1O95825 349 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 SFTPBP07988 381 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 PGAM2P15259 253 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 RRADP55042 308 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 RAB1AP62820 205 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 MALLQ13021 153 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 ZNF345Q14585 488 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 OR10AD1Q8NGE0 317 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 OR56B2PQ8NGI1 322 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 WBP1Q96G27 269 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 C12orf49Q9H741 205 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 ASCL3Q9NQ33 180 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 PCDHB16Q9NRJ7 776 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 IL36GQ9NZH8 169 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 GPR160Q9UJ42 338 aa17.48■□□□□ 0.39
VSX1-202ENST00000376709 C14orf166Q9Y224 244 aaKnown RBP17.48■□□□□ 0.39
VSX1-202ENST00000376709 KANTRA0A1W2PQU2 76 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 PRR33A8MZF0 331 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 OR2F2O95006 317 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 COX5BP10606 129 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 CHATP28329 748 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 ARR3P36575 388 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 SUPT4H1P63272 117 aaKnown RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 OR2F1Q13607 317 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 SURF2Q15527 256 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 ZNF660Q6AZW8 331 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 MRPL21Q7Z2W9 205 aaKnown RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 ZNF611Q8N823 705 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 TMEM178AQ8NBL3 297 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 PRSS33Q8NF86 280 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 SULT4A1Q9BR01 284 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 ZNF2Q9BSG1 426 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 C1QTNF6Q9BXI9 259 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 CHMP1AQ9HD42 196 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 ARHGAP21Q5T5U3 1957 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 LOC400499M0QZD8 3231 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 TRGV5A0A0B4J1U4 118 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 CDK2AP1O14519 115 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 KNG1P01042 644 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 CALHM1Q8IU99 346 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 KCNRGQ8N5I3 272 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 APOBEC3DQ96AK3 386 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 VRK1Q99986 396 aaPredicted RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 REPIN1Q9BWE0 567 aaKnown RBP17.47■□□□□ 0.39
VSX1-202ENST00000376709 PRR13Q9NZ81 148 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 ZFHX4Q86UP3 3567 aa17.47■□□□□ 0.39
VSX1-202ENST00000376709 hCG_1807616A0A1W2PRN6 198 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 SHOXO15266 292 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 NKX2-8O15522 239 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 RRP8O43159 456 aaKnown RBP17.46■□□□□ 0.39
VSX1-202ENST00000376709 OPRM1P35372 400 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 CYCSP99999 105 aaKnown RBP17.46■□□□□ 0.39
VSX1-202ENST00000376709 PLP2Q04941 152 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 BRICD5Q6PL45 260 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 ACOT7LQ6ZUV0 252 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 SLC25A26Q70HW3 274 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 TMPRSS7Q7RTY8 843 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 MICU1Q9BPX6 476 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 NMES1Q9C002 83 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 CFAP47Q6ZTR5 3102 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 RLN2P04090 185 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 CRHP06850 196 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 FCGR3AP08637 254 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 DTYMKP23919 212 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 PSMB6P28072 239 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms