RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TMEM138Q9NPI0 162 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CENPMQ9NSP4 180 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 OCIAD1Q9NX40 245 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 FBXL2Q9UKC9 423 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 RAB22AQ9UL26 194 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 MRPS18BQ9Y676 258 aaKnown RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 LHFPL6Q9Y693 200 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CHCHD2Q9Y6H1 151 aaPredicted RBP4.15□□□□□ -1.75
USP48-202ENST00000374730 U3KQ87 197 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 SPEGQ15772 3267 aa4.15□□□□□ -1.75
USP48-202ENST00000374730 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 VPS13AQ96RL7 3174 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 LOC101059948A0A1B0GTJ6 334 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 METTL21EPA6NDL7 271 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ZNF726A6NNF4 738 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 TMEM14DPA8MWL7 114 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ZNF736B4DX44 427 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 M0R233 179 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 LMX1BO60663 402 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 EIF1BO60739 113 aaKnown RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 NOS1APO75052 506 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 VAMP5O95183 116 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 MPC2O95563 127 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 RAB3DO95716 219 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 CYB5AP00167 134 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 IGLV3-1P01715 115 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 CD3DP04234 171 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 KLK3P07288 261 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 UMODP07911 640 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ZNF735P0CB33 412 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 UBBP0CG47 229 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ZNF43P17038 809 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 TBPP20226 339 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 RAB3AP20336 220 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 GCH1P30793 250 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR3A3P47888 321 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 SSR4P51571 173 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 DSCR4P56555 118 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 CLDN6P56747 220 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 BPIFB3P59826 476 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 TSPAN5P62079 268 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 LSM6P62312 80 aaKnown RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 GRB2P62993 217 aaKnown RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 HIST1H3AP68431 136 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 QRFPP83859 136 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 H3F3AP84243 136 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 SPOCK1Q08629 439 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 UNC119Q13432 240 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OPCMLQ14982 345 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 FAM189A2Q15884 450 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ESCO2Q56NI9 601 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 HIST2H3PS2Q5TEC6 136 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 LPCAT3Q6P1A2 487 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 MYO7BQ6PIF6 2116 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 CORO6Q6QEF8 472 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 Q6ZSR3 168 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 TMPPEQ6ZT21 453 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 HIST2H3AQ71DI3 136 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 PGAP1Q75T13 922 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ZNF584Q8IVC4 421 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR8B12Q8NGG6 310 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR4D10Q8NGI6 311 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR4D6Q8NGJ1 314 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR51S1Q8NGJ8 323 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR1J2Q8NGS2 313 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR2Y1Q8NGV0 311 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR2AJ1Q8NGZ0 328 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 PAQR8Q8TEZ7 354 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 SSC4DQ8WTU2 575 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 NEUROG1Q92886 237 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 TMEM54Q969K7 222 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 FAM46BQ96A09 425 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 FGGYQ96C11 551 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ADAT3Q96EY9 351 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 ELMOD3Q96FG2 381 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OR5B2Q96R09 309 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 CDX2Q99626 313 aaPredicted RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 PRRT1Q99946 306 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 EMC6Q9BV81 110 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 EDEM2Q9BV94 578 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 GAREM1Q9H706 876 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 CA10Q9NS85 328 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 GLTPQ9NZD2 209 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 EIF3KQ9UBQ5 218 aaKnown RBP4.14□□□□□ -1.75
USP48-202ENST00000374730 UBQLN2Q9UHD9 624 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 OPN4Q9UHM6 478 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 KLK13Q9UKR3 277 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 ANAPC10Q9UM13 185 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 POLR1DQ9Y2S0 133 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 NCKAP5O14513 1909 aa4.14□□□□□ -1.75
USP48-202ENST00000374730 MED12Q93074 2177 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 DOCK10Q96BY6 2186 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 A0A0U1RQV5 110 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MEIS3P1A6NDR6 274 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TMEM235A6NFC5 223 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 GJE1A6NN92 205 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 LEUTXA8MZ59 168 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 DISC1C4P0D8 188 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MCRIP1C9JLW8 97 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms