RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 GINS3Q9BRX5 216 aa7.8□□□□□ -1.16
ATG4A-203ENST00000372232 C1orf43Q9BWL3 253 aa7.8□□□□□ -1.16
ATG4A-203ENST00000372232 ZC3H12DA2A288 527 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 C5orf51A6NDU8 294 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 HSD17B6O14756 317 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 FCMRO60667 390 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 DNAJB6O75190 326 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 GOSR1O95249 250 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 WNT11O96014 354 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 GZMHP20718 246 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RPL4P36578 427 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ALDH3B1P43353 468 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 CEBPGP53567 150 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM33P57088 247 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 YPEL5P62699 121 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 EBPQ15125 230 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 MFSD12Q6NUT3 480 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 FIGLAQ6QHK4 219 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 Q6ZSR6 202 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 CMTM1Q8IZ96 169 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF615Q8N8J6 731 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SLC16A11Q8NCK7 471 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 OR10G6Q8NH81 332 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ADAMTS15Q8TE58 950 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 GPX8Q8TED1 209 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ARHGDIGQ99819 225 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 PILRAQ9UKJ1 303 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RBM7Q9Y580 266 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 U3KQE9 123 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 MDC1Q14676 2089 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 FAM229AH3BQW9 127 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 NME2P1O60361 137 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 CDC40O60508 579 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SCGB1D1O95968 90 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 DANCRP0C864 163 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 GIMD1P0DJR0 217 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 CXCR1P25024 350 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SLC25A1P53007 311 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 TAS2R41P59536 307 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SLC35A1P78382 337 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 LTBQ06643 244 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RAB11BQ15907 218 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 TAF9Q16594 264 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RNFT1Q5M7Z0 435 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RPUSD3Q6P087 351 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 OR4N5Q8IXE1 308 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 OR2L13Q8N349 312 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF433Q8N7K0 673 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 OR8S1Q8NH09 359 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 MFSD8Q8NHS3 518 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RPUSD4Q96CM3 377 aaKnown RBP7.79□□□□□ -1.16
ATG4A-203ENST00000372232 MAGT1Q9H0U3 335 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SLC25A18Q9H1K4 315 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 RBKSQ9H477 322 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 SLC17A5Q9NRA2 495 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM242Q9NWH2 141 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 OR5AC2Q9NZP5 309 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 CNIH4Q9P003 139 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 IKZF2Q9UKS7 526 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 DAPP1Q9UN19 280 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 VSIG4Q9Y279 399 aa7.79□□□□□ -1.16
ATG4A-203ENST00000372232 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CLEC18AA5D8T8 446 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 B4DEV8 164 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 FTCDNL1E5RQL4 147 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 NPIPA7E9PJI5 369 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 XKRYO14609 159 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 JTBO76095 146 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 NPIPA8P0DM63 369 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM225BP0DP42 221 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 GABRG2P18507 467 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 PRSS3P35030 304 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 ARR3P36575 388 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 IL13RA1P78552 427 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 COL10A1Q03692 680 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM108Q6UXF1 575 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 RNF44Q7L0R7 432 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CLEC18CQ8NCF0 446 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 OR2T33Q8NG76 320 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 OR4C5Q8NGB2 326 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CST11Q9H112 138 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 TMEM74BQ9NUR3 256 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CPSF4LA6NMK7 179 aaKnown RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 SHISA8B8ZZ34 492 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 MMP23AO75900 390 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 NTN1O95631 604 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 OR5G3P0C626 314 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CPMP14384 443 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 MALP21145 153 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 CSRP1P21291 193 aaKnown RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 ZNF10P21506 573 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-203ENST00000372232 EDNRAP25101 427 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 ST3GAL3Q11203 375 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 FOXF1Q12946 379 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 SLC9A3R2Q15599 337 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 MORN2Q502X0 79 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 SLC22A18ASQ8N1D0 253 aa7.78□□□□□ -1.16
ATG4A-203ENST00000372232 D2HGDHQ8N465 521 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms