RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 IGHV2-5P01817 119 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 TTRP02766 147 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 HKR1P10072 659 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF44P15621 663 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 GNB3P16520 340 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF84P51523 738 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 SUCLG1P53597 346 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 KLRB1Q12918 225 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 HIST2H3AQ71DI3 136 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 C1QL4Q86Z23 238 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 SULF2Q8IWU5 870 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 OR56B1Q8NGI3 324 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 OR5H2Q8NGV7 314 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ASB10Q8WXI3 467 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 WNT2BQ93097 391 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF524Q96C55 264 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 RAB3CQ96E17 227 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 C14orf79Q96F83 325 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 JSRP1Q96MG2 331 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 URM1Q9BTM9 101 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 METTL8Q9H825 291 aaKnown RBP10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 METTL7AQ9H8H3 244 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 OSGIN2Q9Y236 505 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 NBEAQ8NFP9 2946 aa10.02□□□□□ -0.81
TSPAN1-201ENST00000372003 A0A1B0GW64 132 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 PRB1P04280 392 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 SEC11BP0C7V7 166 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF93P35789 620 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 RAB5CP51148 216 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 SUPT4H1P63272 117 aaKnown RBP10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 HGFACQ04756 655 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 RAB32Q13637 225 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 RHEBQ15382 184 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 DHRS11Q6UWP2 260 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 MARCH3Q86UD3 253 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 TMEM178AQ8NBL3 297 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 UBAC2Q8NBM4 344 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 TMEM234Q8WY98 164 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 SLC25A36Q96CQ1 311 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 CMBLQ96DG6 245 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 FAM212BQ9NTI7 297 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 DEPPQ9NTK1 212 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 C1orf123Q9NWV4 160 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 KLRF1Q9NZS2 232 aa10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 KLF13Q9Y2Y9 288 aaPredicted RBP10.01□□□□□ -0.81
TSPAN1-201ENST00000372003 A0A0G2JMM0 328 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 A0A1W2PPB8 328 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 A0A1W2PRS3 328 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 KIR3DP1A8MWS1 328 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 FTCDNL1E5RQL4 147 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 KLRC4-KLRK1H3BQV0 150 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 LINC01387J3KSC0 135 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 WRBO00258 174 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 NME2P1O60361 137 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 RPS2P15880 293 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 NME2P22392 152 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 CPT2P23786 658 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 CD80P33681 288 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 GNALP38405 381 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 FOXK1P85037 733 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 PMP22Q01453 160 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 SLC9A3R2Q15599 337 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 SLC22A6Q4U2R8 563 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 C1QL3Q5VWW1 255 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 RPL7L1Q6DKI1 246 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 Q8NA96 180 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 MFSD8Q8NHS3 518 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 TMEM41AQ96HV5 264 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 KCNK17Q96T54 332 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 NKX3-1Q99801 234 aaPredicted RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 PBOV1Q9GZY1 135 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 SH2D2AQ9NP31 389 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 OR2S2Q9NQN1 319 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 KLHL13Q9P2N7 655 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 B3GALT5Q9Y2C3 310 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 MRPS28Q9Y2Q9 187 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 STRAPQ9Y3F4 350 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 DOCK10Q96BY6 2186 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 TNRC6AQ8NDV7 1962 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 PINLYPA6NC86 204 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 NPIPA5E9PKD4 350 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 K7EPK0 472 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 LMX1BO60663 402 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 CDC14BO60729 498 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 ADAP1O75689 374 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 ZNF20P17024 532 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
TSPAN1-201ENST00000372003 SNCAP37840 140 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 ALDH3B1P43353 468 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 MEOX1P50221 254 aa10□□□□□ -0.81
TSPAN1-201ENST00000372003 P2RY4P51582 365 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms