RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 KCNK15Q9H427 330 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 DOK5Q9P104 306 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 HSBP1O75506 76 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 EIF3IQ13347 325 aaKnown RBP19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF71Q9NQZ8 489 aaPredicted RBP19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 RASL12Q9NYN1 266 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 AKAP11Q9UKA4 1901 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 TUBAL3A6NHL2 446 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 CSF2RBP32927 897 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 PWWP2BQ6NUJ5 590 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 CBLN3Q6UW01 205 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 VPS25Q9BRG1 176 aa19.7■□□□□ 0.74
TM9SF3-201ENST00000371142 C9orf170A2RU37 121 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 RPL13AP40429 203 aaKnown RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 NOL4LQ96MY1 436 aaPredicted RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 BTNL3Q6UXE8 466 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 THSD4Q6ZMP0 1018 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 MOGAT1Q96PD6 335 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 WNT16Q9UBV4 365 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 CST4P01036 141 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 S100A8P05109 93 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 DHRS2Q13268 280 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 C17orf47Q8NEP4 570 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 NAGKQ9UJ70 344 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 RAB32Q13637 225 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 SSX1Q16384 188 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 NRTNQ99748 197 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 WDR61Q9GZS3 305 aaKnown RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 CACNG5Q9UF02 275 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 FAM24AA6NFZ4 105 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 TBX19O60806 448 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 SRSF5Q13243 272 aaKnown RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 RNASEKQ6P5S7 137 aaKnown RBP19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 LILRA6Q6PI73 481 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 C12orf57Q99622 126 aa19.69■□□□□ 0.74
TM9SF3-201ENST00000371142 FGF2P09038 288 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 FGF9P31371 208 aaPredicted RBP19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF275Q9NSD4 429 aaPredicted RBP19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 ZMIZ1Q9ULJ6 1067 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 PHOX2AO14813 284 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 IGHA1P01876 353 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 IGHA2P01877 340 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 KLF3P57682 345 aaPredicted RBP19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 OR6S1Q8NH40 331 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 CTLA4P16410 223 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 MDH2P40926 338 aaKnown RBP19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 OR4D9Q8NGE8 314 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 A0A1W2PRD5 423 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 A0A1W2PRF3 423 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 A0A1W2PRM7 423 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 B3GALNT1O75752 331 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 GALR1P47211 349 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 TGIF2LXQ8IUE1 241 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 MTFP1Q9UDX5 166 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 MBTPS2O43462 519 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 OR5AC1P0C628 307 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 C1orf210Q8IVY1 113 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 GVQW1Q8N7I0 195 aa19.68■□□□□ 0.74
TM9SF3-201ENST00000371142 PGA3P0DJD8 388 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 ETFDHQ16134 617 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 NPEPL1Q8NDH3 523 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 HSD17B10Q99714 261 aaKnown RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 TREM2Q9NZC2 230 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 FNDC7Q5VTL7 733 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 BHLHA9Q7RTU4 235 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 LIMS2Q7Z4I7 341 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 EID2BQ96D98 161 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 FAM60AQ9NP50 221 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 IL36GQ9NZH8 169 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 SERTM1A2A2V5 107 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 TOX3O15405 576 aaPredicted RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 EPHA8P29322 1005 aaPredicted RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 GAMTQ14353 236 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 GGNBP1Q5YKI7 109 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 VN1R4Q7Z5H5 301 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 NXF2Q9GZY0 626 aaKnown RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 CTGFP29279 349 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 TMEM108Q6UXF1 575 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 ZNF547Q8IVP9 402 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 TMEM37Q8WXS4 190 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 NAA60Q9H7X0 242 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 MMP26Q9NRE1 261 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 OR1A1Q9P1Q5 309 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 TRAPPC4Q9Y296 219 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 OR3A1P47881 315 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 B3GNTL1Q67FW5 361 aaPredicted RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 FAM109BQ6ICB4 259 aaPredicted RBP19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 ALG14Q96F25 216 aa19.67■□□□□ 0.74
TM9SF3-201ENST00000371142 F5H697 171 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 CDC42EP2O14613 210 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 RAB7AP51149 207 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 NXPH1P58417 271 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 TIAL1Q01085 375 aaKnown RBP eCLIP19.66■□□□□ 0.741e-7■■■■□ 20.2
TM9SF3-201ENST00000371142 C3AR1Q16581 482 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 MOGAT2Q3SYC2 334 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 HES3Q5TGS1 186 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 A0A1W2PNV4 684 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 BMI1P35226 326 aa19.66■□□□□ 0.74
TM9SF3-201ENST00000371142 NHLRC1Q6VVB1 395 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms