RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 OPN1MWP04001 364 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 OPN1MW2P0DN77 364 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 OPN1MW3P0DN78 364 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 DLK1P80370 383 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 C21orf62-AS1Q17RA5 79 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 FFAR4Q5NUL3 377 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ROBO4Q8WZ75 1007 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ICAM5Q9UMF0 924 aa14.16□□□□□ -0.14
COL17A1-202ENST00000369733 ATAD5Q96QE3 1844 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 H3BMH7 237 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 CST2P09228 141 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 NANOS3P60323 173 aaKnown RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 PSG6Q00889 435 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ZAR1Q86SH2 424 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 PUSL1Q8N0Z8 303 aaKnown RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 C17orf78Q8N4C9 275 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ASB5Q8WWX0 329 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 MCHR2Q969V1 340 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ALKBH3Q96Q83 286 aaPredicted RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 KCNAB3O43448 404 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 POLR2GP62487 172 aaKnown RBP eCLIP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 SLC38A11Q08AI6 406 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 MICBQ29980 383 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 K7EQM0 130 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 INSM1Q01101 510 aaPredicted RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 PNRC1Q12796 327 aaPredicted RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ISXQ2M1V0 245 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 FAM219AQ8IW50 185 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 SF3B6Q9Y3B4 125 aaKnown RBP14.15□□□□□ -0.14
COL17A1-202ENST00000369733 A0A1W2PPV9 198 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 CDRT15L2A8MXV6 281 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ABCD4O14678 606 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 ERVS71-1P61550 626 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 RAB35Q15286 201 aa14.15□□□□□ -0.14
COL17A1-202ENST00000369733 PTP4A3O75365 173 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 DYNLT3P51808 116 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 FBXO17Q96EF6 278 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 SPTY2D1-AS1A0A0U1RR47 76 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 A0A1W2PPC4 97 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 RPS16P62249 146 aaKnown RBP14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CLN3Q13286 438 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 GGTLC2Q14390 218 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 TMEM183BQ1AE95 376 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CEACAM16Q2WEN9 425 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 FAM162BQ5T6X4 162 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 LHX8Q68G74 356 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 LINC00518Q8N0U6 118 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 POM121Q96HA1 1249 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 NRIP2Q9BQI9 281 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 DYNLRB1Q9NP97 96 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 SUB1P53999 127 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CD226Q15762 336 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 TSPO2Q5TGU0 170 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 OR8B12Q8NGG6 310 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 KLRC4-KLRK1H3BQV0 150 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CD1AP06126 327 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 HOXC8P31273 242 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 MRPL24Q96A35 216 aaKnown RBP14.14□□□□□ -0.15
COL17A1-202ENST00000369733 SPACA9Q96E40 222 aaPredicted RBP14.14□□□□□ -0.15
COL17A1-202ENST00000369733 SNX22Q96L94 193 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 KLK13Q9UKR3 277 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CHRNA7P36544 502 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 C1QL3Q5VWW1 255 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CISD2Q8N5K1 135 aaKnown RBP14.14□□□□□ -0.15
COL17A1-202ENST00000369733 OR4C5Q8NGB2 326 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 FOXB1Q99853 325 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 LRRC61Q9BV99 259 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 COL24A1Q17RW2 1714 aa14.14□□□□□ -0.15
COL17A1-202ENST00000369733 CENPVL1A0A0U1RR11 272 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 LILRA5A6NI73 299 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 KRASP01116 189 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 CASP6P55212 293 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 MIA3Q5JRA6 1907 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 LILRA6Q6PI73 481 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 ASB10Q8WXI3 467 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 WFDC6Q9BQY6 131 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 ANXA10Q9UJ72 324 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 M0R143 59 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 MUC1P15941 1255 aaPredicted RBP14.13□□□□□ -0.15
COL17A1-202ENST00000369733 NHLRC3Q5JS37 347 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 ZPLD1Q8TCW7 415 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 VSTM2LQ96N03 204 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 TBX21Q9UL17 535 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 TCAPO15273 167 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 IL24Q13007 206 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 THOC3Q96J01 351 aaKnown RBP14.13□□□□□ -0.15
COL17A1-202ENST00000369733 ERRFI1Q9UJM3 462 aaPredicted RBP14.13□□□□□ -0.15
COL17A1-202ENST00000369733 H3BQ15 152 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 PDCD6O75340 191 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 HSBP1O75506 76 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 S100A7P31151 101 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 H1FXQ92522 213 aaKnown RBP14.13□□□□□ -0.15
COL17A1-202ENST00000369733 GALMQ96C23 342 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 MRPS24Q96EL2 167 aaKnown RBP14.13□□□□□ -0.15
COL17A1-202ENST00000369733 Q9N2K0 584 aa14.13□□□□□ -0.15
COL17A1-202ENST00000369733 NKX6-3A6NJ46 265 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PTBP3O95758 552 aaKnown RBP14.12□□□□□ -0.15
COL17A1-202ENST00000369733 IL22RA2Q969J5 263 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 MEGF10Q96KG7 1140 aa14.12□□□□□ -0.15
COL17A1-202ENST00000369733 PRSS27Q9BQR3 290 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms