RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 RPL36Q9Y3U8 105 aaKnown RBP15.58■□□□□ 0.08
CKS1B-203ENST00000368439 F8VVB4 439 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 F8VWA3 439 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 CLIC3O95833 236 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 FADS2O95864 444 aaKnown RBP15.57■□□□□ 0.08
CKS1B-203ENST00000368439 RNASE1P07998 156 aaKnown RBP15.57■□□□□ 0.08
CKS1B-203ENST00000368439 CEBPDP49716 269 aaPredicted RBP15.57■□□□□ 0.08
CKS1B-203ENST00000368439 ALKBH1Q13686 389 aaKnown RBP15.57■□□□□ 0.08
CKS1B-203ENST00000368439 LRRC36Q1X8D7 754 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF691Q5VV52 312 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 METAP1DQ6UB28 335 aaPredicted RBP15.57■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF555Q8NEP9 628 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 OR51A4Q8NGJ6 313 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 GATAD2BQ8WXI9 593 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 PP6455Q8WZ26 134 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 TNFRSF14Q92956 283 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 JAM3Q9BX67 310 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 ONECUT1Q9UBC0 465 aa15.57■□□□□ 0.08
CKS1B-203ENST00000368439 DSCAML1Q8TD84 2053 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 E9PI62 339 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 NXPH2O95156 264 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 LIMS3P0CW19 117 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 LIMS4P0CW20 117 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 NDUFB7P17568 137 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 PEX2P28328 305 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 PRDX2P32119 198 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 RCN1Q15293 331 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 C12orf54Q6X4T0 127 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 Q6YL49 198 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 C1orf122Q6ZSJ8 110 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 UTS2BQ765I0 119 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 PIP4P2Q8N4L2 257 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF561Q8N587 486 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 PACRGLQ8N7B6 248 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 DNAAF1Q8NEP3 725 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 TMEM185AQ8NFB2 350 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 GCDHQ92947 438 aaPredicted RBP15.56■□□□□ 0.08
CKS1B-203ENST00000368439 FGGYQ96C11 551 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 FGF20Q9NP95 211 aaPredicted RBP15.56■□□□□ 0.08
CKS1B-203ENST00000368439 SIRT7Q9NRC8 400 aa15.56■□□□□ 0.08
CKS1B-203ENST00000368439 ANKRD65E5RJM6 399 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 RNASEK-C17orf49H0YIS7 233 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 HOXA3O43365 443 aaPredicted RBP15.55■□□□□ 0.08
CKS1B-203ENST00000368439 SERPINA3P01011 423 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 HKR1P10072 659 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 ATF1P18846 271 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 DLX1P56177 255 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 ADARB1P78563 741 aaKnown RBP15.55■□□□□ 0.08
CKS1B-203ENST00000368439 CNN3Q15417 329 aaKnown RBP15.55■□□□□ 0.08
CKS1B-203ENST00000368439 KLHL22Q53GT1 634 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 CNIH3Q8TBE1 160 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 BORCS8Q96FH0 119 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 MRPL48Q96GC5 212 aaKnown RBP15.55■□□□□ 0.08
CKS1B-203ENST00000368439 UNKLQ9H9P5 680 aaKnown RBP15.55■□□□□ 0.08
CKS1B-203ENST00000368439 NOX4Q9NPH5 578 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 C8orf4Q9NR00 106 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 HHLA2Q9UM44 414 aa15.55■□□□□ 0.08
CKS1B-203ENST00000368439 TRBV23-1A0A0A0MS06 115 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 M0R1W7 72 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 KNG1P01042 644 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 CFPP27918 469 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 PRB3Q04118 309 aaPredicted RBP15.54■□□□□ 0.08
CKS1B-203ENST00000368439 CRIP3Q6Q6R5 217 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 SLC25A26Q70HW3 274 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 RNF144BQ7Z419 303 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 PDZD9Q8IXQ8 264 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 CMTM4Q8IZR5 234 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 SLAMF9Q96A28 289 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 SLC25A28Q96A46 364 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 CEP19Q96LK0 163 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 MYCBPQ99417 103 aaPredicted RBP15.54■□□□□ 0.08
CKS1B-203ENST00000368439 C19orf12Q9NSK7 152 aa15.54■□□□□ 0.08
CKS1B-203ENST00000368439 A0A0U1RQK1 487 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 CASQ2O14958 399 aaPredicted RBP15.53■□□□□ 0.08
CKS1B-203ENST00000368439 ZFPL1O95159 310 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 MELTFP08582 738 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 AZGP1P25311 298 aaKnown RBP15.53■□□□□ 0.08
CKS1B-203ENST00000368439 RBP2P50120 134 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 OGFRL1Q5TC84 451 aaPredicted RBP15.53■□□□□ 0.08
CKS1B-203ENST00000368439 TTC23Q5W5X9 447 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 ZDHHC16Q969W1 377 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 OR14J1Q9UGF5 321 aa15.53■□□□□ 0.08
CKS1B-203ENST00000368439 A0A1W2PQ09 198 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 SLC1A7O00341 560 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF737O75373 536 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 MT-ND2P03891 347 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 TK1P04183 234 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF20P17024 532 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 PRKACBP22694 351 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 GTF2A1P52655 376 aaPredicted RBP15.52■□□□□ 0.08
CKS1B-203ENST00000368439 ATP1B3P54709 279 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 MRPL28Q13084 256 aaKnown RBP15.52■□□□□ 0.08
CKS1B-203ENST00000368439 KLRD1Q13241 179 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 AWAT1Q58HT5 328 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 HCP5Q6MZN7 132 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 C11orf42Q8N5U0 333 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 ZNF676Q8N7Q3 588 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 OR13C3Q8NGS6 347 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 CYGBQ8WWM9 190 aa15.52■□□□□ 0.08
CKS1B-203ENST00000368439 TAF15Q92804 592 aaKnown RBP eCLIP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms