RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 NCKAP5O14513 1909 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 OR2V1Q8NHB1 315 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 FRYQ5TBA9 3013 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 ACTL6AO96019 429 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 C9orf135Q5VTT2 229 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 FBXL14Q8N1E6 418 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 KCNE4Q8WWG9 221 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 PIGCQ92535 297 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 WNT5BQ9H1J7 359 aa15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
UBQLN4-201ENST00000368309 FGF16O43320 207 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 SRYQ05066 204 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 IL15RAQ13261 267 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 PLEKHN1Q494U1 663 aaPredicted RBP15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 RNF141Q8WVD5 230 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 TIMM10BQ9Y5J6 103 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 SHANK1Q9Y566 2161 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 OR6C6A6NF89 314 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 FXYD4P59646 89 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 SLC23A3Q6PIS1 610 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 SGPP2Q8IWX5 399 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 CCDC36Q8IYA8 594 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 TMEM105Q8N8V8 129 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 OR2H1Q9GZK4 316 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 TMEM231Q9H6L2 316 aa15.71■□□□□ 0.11
UBQLN4-201ENST00000368309 DNASE2O00115 360 aaPredicted RBP15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 CNN3Q15417 329 aaKnown RBP15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 SURF2Q15527 256 aaPredicted RBP15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 OR2A2Q6IF42 318 aa15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 CT55Q8WUE5 264 aa15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 C1orf123Q9NWV4 160 aa15.71■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF705EA8MWA4 302 aaPredicted RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ABCD4O14678 606 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 CYB561P49447 251 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 NAAAQ02083 359 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 RPL7L1Q6DKI1 246 aaKnown RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 MARS2Q96GW9 593 aaKnown RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ADGRG7Q96K78 797 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 AQP10Q96PS8 301 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 P4HTMQ9NXG6 502 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF587BE7ETH6 402 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 GPR31O00270 319 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 DNPH1O43598 174 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 FAM157CP0CG43 387 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 LYL1P12980 280 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ICAM2P13598 275 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 FAM3AP98173 230 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 TSPO2Q5TGU0 170 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 RTL6Q6ICC9 239 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 OR10AD1Q8NGE0 317 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 MRPL24Q96A35 216 aaKnown RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ADAT1Q9BUB4 502 aaKnown RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 SLC5A7Q9GZV3 580 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 SLC6A15Q9H2J7 730 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 GPR35Q9HC97 309 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 LOXL2Q9Y4K0 774 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 FREM1Q5H8C1 2179 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 TMEM218A2RU14 115 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 RCC1P18754 421 aaPredicted RBP15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 PIGPP57054 158 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 PPA1Q15181 289 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 ST3GAL6Q9Y274 331 aa15.7■□□□□ 0.1
UBQLN4-201ENST00000368309 CA11O75493 328 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CD79AP11912 226 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 ZNF708P17019 499 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 SPEM2Q0P670 501 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CCDC54Q8NEL0 328 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 TSNAXQ99598 290 aaKnown RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 NKX6-2Q9C056 277 aaPredicted RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 HRH4Q9H3N8 390 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 TMEM100Q9NV29 134 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 TNRC6BQ9UPQ9 1833 aaKnown RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 SCGB1D2O95969 90 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 FCGR3AP08637 254 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CCNOP22674 350 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 FNDC9Q8TBE3 224 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 IER2Q9BTL4 223 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CTSDP07339 412 aaPredicted RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CHATP28329 748 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 PEAR1Q5VY43 1037 aaPredicted RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 GGNBP1Q5YKI7 109 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 PLCXD3Q63HM9 321 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 C6orf15Q6UXA7 325 aaPredicted RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 CLEC9AQ6UXN8 241 aa15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 LSM5Q9Y4Y9 91 aaKnown RBP15.69■□□□□ 0.1
UBQLN4-201ENST00000368309 RAB19A4D1S5 217 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 ATP6V1G2-DDX39BF2Z307 99 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 RRP8O43159 456 aaKnown RBP15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 PET100P0DJ07 73 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 GUCA2BQ16661 112 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 PHLDA2Q53GA4 152 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 C1orf210Q8IVY1 113 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 OSR2Q8N2R0 312 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 CPEB3Q8NE35 698 aaKnown RBP15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 CNTNAP3BQ96NU0 1288 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 CNTNAP3Q9BZ76 1288 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 SMIM3Q9BZL3 60 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 MEMO1Q9Y316 297 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 DOCK10Q96BY6 2186 aa15.68■□□□□ 0.1
UBQLN4-201ENST00000368309 ATG12O94817 140 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 329.6 ms