RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 FGF20Q9NP95 211 aaPredicted RBP19.74■□□□□ 0.75
PFDN2-201ENST00000368010 IRGMA1A4Y4 181 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 CASQ2O14958 399 aaPredicted RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 GBX2P52951 348 aaPredicted RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 UBA52P62987 128 aaKnown RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 ACTG1P63261 375 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 ADARB1P78563 741 aaKnown RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 BAMBIQ13145 260 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 IL18R1Q13478 541 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 OGFRL1Q5TC84 451 aaPredicted RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 UTS2BQ765I0 119 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 BATF2Q8N1L9 274 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 KIR3DL3Q8N743 410 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 DNAAF1Q8NEP3 725 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 OR13C3Q8NGS6 347 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 OR10AC1Q8NH08 325 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 HES4Q9HCC6 221 aa19.73■□□□□ 0.75
PFDN2-201ENST00000368010 SOX21Q9Y651 276 aaPredicted RBP19.73■□□□□ 0.75
PFDN2-201ENST00000368010 IGKV1-27A0A075B6S5 117 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 CENPVL3A0A0U1RRI6 287 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 SLC1A7O00341 560 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 RPSAP08865 295 aaKnown RBP19.72■□□□□ 0.75
PFDN2-201ENST00000368010 CCDC159P0C7I6 412 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 LIMS3P0CW19 117 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 LIMS4P0CW20 117 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 PRKACBP22694 351 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 DCKP27707 260 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 PRDX2P32119 198 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 RBP2P50120 134 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 CAPZA1P52907 286 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 ERVK11-1P61568 191 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 CD177Q8N6Q3 437 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 OR51A4Q8NGJ6 313 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 GATAD2BQ8WXI9 593 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 SPSB1Q96BD6 273 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 COMMD4Q9H0A8 199 aa19.72■□□□□ 0.75
PFDN2-201ENST00000368010 A0A1W2PQ09 198 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 DNAJC9-AS1A6NH13 148 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 TMEM212A6NML5 194 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 KNG1P01042 644 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 OCM2P0CE71 109 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 OCMP0CE72 109 aaPredicted RBP19.71■□□□□ 0.75
PFDN2-201ENST00000368010 ATF1P18846 271 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 AZGP1P25311 298 aaKnown RBP19.71■□□□□ 0.75
PFDN2-201ENST00000368010 ATP1B3P54709 279 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 GABPB1Q06547 395 aaPredicted RBP19.71■□□□□ 0.75
PFDN2-201ENST00000368010 RUSC1-AS1Q66K80 236 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 VMO1Q7Z5L0 202 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 ZNF561Q8N587 486 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 LHX4Q969G2 390 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 CEP19Q96LK0 163 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 VCXQ9H320 206 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 ZMAT3Q9HA38 289 aaKnown RBP19.71■□□□□ 0.75
PFDN2-201ENST00000368010 ELL3Q9HB65 397 aaPredicted RBP19.71■□□□□ 0.75
PFDN2-201ENST00000368010 HSPE1-MOB4S4R3N1 261 aa19.71■□□□□ 0.75
PFDN2-201ENST00000368010 TRBV23-1A0A0A0MS06 115 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 IGKV1-9A0A0C4DH69 117 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 E9PI62 339 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 ZFPL1O95159 310 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 PRTN3P24158 256 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 CAPGP40121 348 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 CEBPDP49716 269 aaPredicted RBP19.7■□□□□ 0.74
PFDN2-201ENST00000368010 LHFPL2Q6ZUX7 228 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 SLC25A26Q70HW3 274 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 OR5AK2Q8NH90 309 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 SLAMF9Q96A28 289 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 DCLRE1BQ9H816 532 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 MTCH1Q9NZJ7 389 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 OR14J1Q9UGF5 321 aa19.7■□□□□ 0.74
PFDN2-201ENST00000368010 IGHV1-69DA0A0B4J2H0 117 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 MDFIC2A0A1B0GVS7 189 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 H0YAE9 185 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 CYB5AP00167 134 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 IGHV1-69P01742 117 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 MYL12AP19105 171 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 MTCP1P56278 107 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 DEFB112Q30KQ8 113 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 TMPRSS11AQ6ZMR5 421 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 ZDHHC16Q969W1 377 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 C1orf147Q96MC9 270 aaPredicted RBP19.69■□□□□ 0.74
PFDN2-201ENST00000368010 OPALINQ96PE5 141 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 DUX5Q96PT3 197 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 NEK6Q9HC98 313 aa19.69■□□□□ 0.74
PFDN2-201ENST00000368010 CAB39Q9Y376 341 aaPredicted RBP19.69■□□□□ 0.74
PFDN2-201ENST00000368010 TRBV2A0A0J9YWF9 115 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 POU3F4P49335 361 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 ETV1P50549 477 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 BLMHQ13867 455 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 MKXQ8IYA7 352 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 C8orf59Q8N0T1 100 aaPredicted RBP19.68■□□□□ 0.74
PFDN2-201ENST00000368010 OR13C9Q8NGT0 318 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 GCDHQ92947 438 aaPredicted RBP19.68■□□□□ 0.74
PFDN2-201ENST00000368010 PDCD1LG2Q9BQ51 273 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 SIRT7Q9NRC8 400 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 DIMT1Q9UNQ2 313 aaKnown RBP19.68■□□□□ 0.74
PFDN2-201ENST00000368010 DHDHQ9UQ10 334 aa19.68■□□□□ 0.74
PFDN2-201ENST00000368010 EXOSC1Q9Y3B2 195 aaKnown RBP19.68■□□□□ 0.74
PFDN2-201ENST00000368010 CLDN34H7C241 214 aa19.67■□□□□ 0.74
PFDN2-201ENST00000368010 M0R1W7 72 aa19.67■□□□□ 0.74
PFDN2-201ENST00000368010 INMTO95050 263 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms