RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
PRKN-204ENST00000366896 TMEM59Q9BXS4 323 aa12.89□□□□□ -0.35
PRKN-204ENST00000366896 TMPRSS5Q9H3S3 457 aa12.89□□□□□ -0.35
PRKN-204ENST00000366896 KLRF1Q9NZS2 232 aa12.89□□□□□ -0.35
PRKN-204ENST00000366896 hCG_1809904A0A1W2PP81 198 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 A0A1W2PR64 198 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 A0A1W2PRV1 198 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 ZNF814B7Z6K7 855 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 RAD51DO75771 328 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 ZNF17P17021 662 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 PI3P19957 117 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 TMEM50BP56557 158 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 S100A10P60903 97 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 OR8B12Q8NGG6 310 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 RGCCQ9H4X1 137 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 PNRC2Q9NPJ4 139 aaKnown RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 CCDC187A0A096LP49 1063 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 A0A1W2PNR3 127 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 CA11O75493 328 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 ONECUT2O95948 504 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 KLK2P20151 261 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 PTGDSP41222 190 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 GRB2P62993 217 aaKnown RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 FAM71F1Q96KD3 344 aaPredicted RBP12.88□□□□□ -0.35
PRKN-204ENST00000366896 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 DMRT1Q9Y5R6 373 aa12.88□□□□□ -0.35
PRKN-204ENST00000366896 DMXL1Q9Y485 3027 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 RER1O15258 196 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 RAMP1O60894 148 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 JTBO76095 146 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 IGLV3-1P01715 115 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 HEXBP07686 556 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 RPS2P15880 293 aaKnown RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 SNCAP37840 140 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 ZNF121P58317 390 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 OR2A2Q6IF42 318 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 OXGR1Q96P68 337 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 GSKIPQ9P0R6 139 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 MEMO1Q9Y316 297 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 C5orf63A6NC05 138 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 FOXI3A8MTJ6 420 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 NR2C1P13056 603 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 ZNF708P17019 499 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 HTR5AP47898 357 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 UCP2P55851 309 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 FAM3AP98173 230 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 PPA1Q15181 289 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 Q6ZSR3 168 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 COMMD1Q8N668 190 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 OR10G3Q8NGC4 313 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 WDR77Q9BQA1 342 aaPredicted RBP12.87□□□□□ -0.35
PRKN-204ENST00000366896 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
PRKN-204ENST00000366896 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 FIGNL2A6NMB9 653 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 M0R036 132 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 TSPAN15O95858 294 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 JMJD7P0C870 316 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 DAOP14920 347 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 RPL12P30050 165 aaKnown RBP12.86□□□□□ -0.35
PRKN-204ENST00000366896 THBS4P35443 961 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 TAS2R46P59540 309 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 DCAF12Q5T6F0 453 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 RTL6Q6ICC9 239 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 CCDC54Q8NEL0 328 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OR5H2Q8NGV7 314 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OSGIN2Q9Y236 505 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 E9PLN8 166 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 CYC1P08574 325 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 HOXB5P09067 269 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
PRKN-204ENST00000366896 NKAIN1Q4KMZ8 207 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OR2B11Q5JQS5 317 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OR14K1Q8NGZ2 314 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 OR13G1Q8NGZ3 307 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 DDA1Q9BW61 102 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
PRKN-204ENST00000366896 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
PRKN-204ENST00000366896 K7EPK0 472 aa12.85□□□□□ -0.35
PRKN-204ENST00000366896 HCKP08631 526 aa12.85□□□□□ -0.35
PRKN-204ENST00000366896 MAS1LP35410 378 aa12.85□□□□□ -0.35
PRKN-204ENST00000366896 ECI1P42126 302 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms