RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
SMC5-201ENST00000361138 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
SMC5-201ENST00000361138 TLNRD1Q9H1K6 362 aa12.4□□□□□ -0.42
SMC5-201ENST00000361138 PITPNC1Q9UKF7 332 aa12.4□□□□□ -0.42
SMC5-201ENST00000361138 OR5H15A6NDH6 313 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 OR5H1A6NKK0 313 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 TERTO14746 1132 aaKnown RBP12.4□□□□□ -0.43
SMC5-201ENST00000361138 TNFSF11O14788 317 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 PNPP00491 289 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 EXT1Q16394 746 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 CA5BP1Q8WTZ4 195 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 OR5AC2Q9NZP5 309 aa12.4□□□□□ -0.43
SMC5-201ENST00000361138 RCC2Q9P258 522 aaKnown RBP12.4□□□□□ -0.43
SMC5-201ENST00000361138 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
SMC5-201ENST00000361138 OR10J4P0C629 311 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ZNF17P17021 662 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 PMCHP20382 165 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 KIR3DL2P43630 455 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 HDGFL3Q9Y3E1 203 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 DHHO43323 396 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 IL24Q13007 206 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 OR5AS1Q8N127 324 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 OR1N1Q8NGS0 311 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 CORO2AQ92828 525 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 IL22RA2Q969J5 263 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 PTX4Q96A99 478 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 TRBV5-5A0A0J9YX44 114 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 C4orf47A7E2U8 309 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 FAM162BQ5T6X4 162 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 CBLN3Q6UW01 205 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 SMIM15Q7Z3B0 74 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 SHISA8B8ZZ34 492 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 IGHEP01854 428 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ZNF25P17030 456 aaPredicted RBP12.39□□□□□ -0.43
SMC5-201ENST00000361138 UBE2G1P62253 170 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 MYBPHQ13203 477 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 PLAC9Q5JTB6 97 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 OR5B3Q8NH48 314 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 TTC3P53804 2025 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 DVL1O14640 695 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 CLDN15P56746 228 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 POLR2GP62487 172 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMC5-201ENST00000361138 PSG6Q00889 435 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 EWSR1Q01844 656 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMC5-201ENST00000361138 SLC38A11Q08AI6 406 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 FAM78BQ5VT40 261 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ZAR1Q86SH2 424 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 OR8B12Q8NGG6 310 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 ZNF596Q8TC21 504 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 OIT3Q8WWZ8 545 aa12.39□□□□□ -0.43
SMC5-201ENST00000361138 TRAF3IP2O43734 574 aaPredicted RBP12.38□□□□□ -0.43
SMC5-201ENST00000361138 TNFSF4P23510 183 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 ZBTB25P24278 435 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 TAS2R45P59539 299 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 DRAM2Q6UX65 266 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 LANCL3Q6ZV70 420 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 ADPRHL1Q8NDY3 354 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 PDCD1Q15116 288 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 TSEN54Q7Z6J9 526 aaKnown RBP12.38□□□□□ -0.43
SMC5-201ENST00000361138 HLA-CQ95604 372 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 MYO16Q9Y6X6 1858 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 CSNK1EP49674 416 aaKnown RBP12.38□□□□□ -0.43
SMC5-201ENST00000361138 RHOVQ96L33 236 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 SLC26A1Q9H2B4 701 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 TRBV23-1A0A0A0MS06 115 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 DUXBA0A1W2PPF3 345 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 OR2M5A3KFT3 312 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 TOX4O94842 621 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 VSIG8P0DPA2 414 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
SMC5-201ENST00000361138 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 DMRT1Q9Y5R6 373 aa12.38□□□□□ -0.43
SMC5-201ENST00000361138 MYOGP15173 224 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 C21orf62-AS1Q17RA5 79 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 NKAIN1Q4KMZ8 207 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 ANKRD33Q7Z3H0 272 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 ANXA10Q9UJ72 324 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 GPM6AP51674 278 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 POLDIP2Q9Y2S7 368 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 CHRNA7P36544 502 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 FAM3AP98173 230 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 EDDM3AQ14507 147 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 BSXQ3C1V8 233 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 VSTM2LQ96N03 204 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 CLN5O75503 358 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
SMC5-201ENST00000361138 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
SMC5-201ENST00000361138 OR1F12Q8NHA8 337 aa12.37□□□□□ -0.43
SMC5-201ENST00000361138 ALG1L2C9J202 215 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms