RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 C5orf63A6NC05 138 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RNF222A6NCQ9 220 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 FOXI3A8MTJ6 420 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ZIC3O60481 467 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 KLF7O75840 302 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 OR2F2O95006 317 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 LIPCP11150 499 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 HIST1H1DP16402 221 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ALDH3B1P43353 468 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 OR2F1Q13607 317 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RSPO1Q2MKA7 263 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 VAX1Q5SQQ9 334 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 FAM57BQ71RH2 274 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SLC38A6Q8IZM9 456 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 FAM89BQ8N5H3 189 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 OR4K15Q8NH41 348 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PPP1R1CQ8WVI7 109 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 NABP1Q96AH0 204 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RAB3CQ96E17 227 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 FAM71F1Q96KD3 344 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PHB2Q99623 299 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 MICU1Q9BPX6 476 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 WDR13Q9H1Z4 485 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SDK2Q58EX2 2172 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 EML6Q6ZMW3 1958 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 C17orf100A8MU93 164 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 F5H0A9 414 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 MFNGO00587 321 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 CCSO14618 274 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TLX3O43711 291 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RAD51DO75771 328 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SPDEFO95238 335 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 DUS4LO95620 317 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SCGB1D1O95968 90 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PMP2P02689 132 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 HOXD4P09016 255 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 UBBP0CG47 229 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PRF1P14222 555 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 CPT2P23786 658 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RPS27AP62979 156 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 UBA52P62987 128 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ENDOGQ14249 297 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PNLIPRP3Q17RR3 467 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 MICBQ29980 383 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TRAT1Q6PIZ9 186 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 OPN5Q6U736 354 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 HSD17B13Q7Z5P4 300 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 COMMD2Q86X83 199 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PDZD9Q8IXQ8 264 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 M1APQ8TC57 530 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PAQR8Q8TEZ7 354 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SEC22AQ96IW7 307 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 V9GYS6 101 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 FRYQ5TBA9 3013 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 LOC100509620A0A075B734 347 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 A0A0U1RQV5 110 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 A0A1W2PP11 408 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 NTN3O00634 580 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 CCL3P10147 92 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 NR2C1P13056 603 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 LIFP15018 202 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 MSR1P21757 451 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 OTX1P32242 354 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SUCLG1P53597 346 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ATP1B3P54709 279 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 F2RL1P55085 397 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 DSCR4P56555 118 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TMPRSS3P57727 454 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ECH1Q13011 328 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 EXT1Q16394 746 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM123Q8N131 208 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF283Q8N7M2 679 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TERB2Q8NHR7 220 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SAT2Q96F10 170 aaPredicted RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 ZNF385AQ96PM9 386 aaKnown RBP6.35□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM59Q9BXS4 323 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 SHARPINQ9H0F6 387 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 BANF2Q9H503 90 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 RASL12Q9NYN1 266 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 GPR132Q9UNW8 380 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 HS3ST3B1Q9Y662 390 aa6.35□□□□□ -1.39
CLCN3-202ENST00000360642 PI4KAP42356 2102 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 AHRRA9YTQ3 701 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 EIF1BO60739 113 aaKnown RBP6.34□□□□□ -1.39
CLCN3-202ENST00000360642 VAMP5O95183 116 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 IFNA6P05013 189 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 HCKP08631 526 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ZFP36L1Q07352 338 aaKnown RBP6.34□□□□□ -1.39
CLCN3-202ENST00000360642 FAM189A2Q15884 450 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ACOT7LQ6ZUV0 252 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ARRDC1Q8N5I2 433 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 TMEM185AQ8NFB2 350 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 GJC3Q8NFK1 279 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 OR56B1Q8NGI3 324 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 ARHGAP5-AS1Q96IT6 56 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 PDCD10Q9BUL8 212 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 GHRLQ9UBU3 117 aa6.34□□□□□ -1.39
CLCN3-202ENST00000360642 D6RAR5 112 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms