RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RNASEK-C17orf49H0YIS7 233 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 AP4M1O00189 453 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 DHRS3O75911 302 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 DUS4LO95620 317 aaKnown RBP10.83□□□□□ -0.68
COL20A1-201ENST00000358894 FABP4P15090 132 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
COL20A1-201ENST00000358894 LGI3Q8N145 548 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF383Q8NA42 475 aa10.83□□□□□ -0.68
COL20A1-201ENST00000358894 LOC101059948A0A1B0GTJ6 334 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PRR19A6NJB7 356 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 SERPINE3A8MV23 424 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 TIAF1O95411 115 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 MT-ND4LP03901 98 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 MST1P26927 711 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 THBS4P35443 961 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 MICBQ29980 383 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 LILRB2Q8N423 598 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 CNEP1R1Q8N9A8 125 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 SPOCK3Q9BQ16 436 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 KCNK7Q9Y2U2 307 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 RIF1Q5UIP0 2472 aaKnown RBP10.82□□□□□ -0.68
COL20A1-201ENST00000358894 CBY3A6NI87 242 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PATE3B3GLJ2 98 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF32P17041 273 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PAX6P26367 422 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PI4KAP42356 2102 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PLPPR5Q32ZL2 321 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 LURAP1LQ8IV03 231 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 LRRC75AQ8NAA5 344 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 OR9K2Q8NGE7 335 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 RDH5Q92781 318 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF385AQ96PM9 386 aaKnown RBP10.82□□□□□ -0.68
COL20A1-201ENST00000358894 FOXB1Q99853 325 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PLSCR5A0PG75 271 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 C5orf49A4QMS7 147 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 TGOLN2O43493 480 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PLAURQ03405 335 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF124Q15973 351 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 PNLIPRP3Q17RR3 467 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 OR51H1Q8NH63 302 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 RHOVQ96L33 236 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 KCNK17Q96T54 332 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 TIMP4Q99727 224 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
COL20A1-201ENST00000358894 IGKV1D-43A0A0B4J1Z2 117 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 HS3ST1O14792 307 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 OR5AS1Q8N127 324 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 OR2M3Q8NG83 312 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 NANOS1Q8WY41 292 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 GFI1Q99684 422 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 MFRPQ9BY79 579 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 DCAF16Q9NXF7 216 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 MASP2O00187 686 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 HSD17B6O14756 317 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 ST8SIA3O43173 380 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 IGHEP01854 428 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 RRADP55042 308 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF239Q16600 458 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 HFEQ30201 348 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 C6orf15Q6UXA7 325 aaPredicted RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 OR1F12Q8NHA8 337 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 MED9Q9NWA0 146 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 ICE1Q9Y2F5 2266 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 COL4A4P53420 1690 aaPredicted RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 NUDT19A8MXV4 375 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 ST8SIA5O15466 376 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 NDUFS6O75380 124 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 FPR2P25090 351 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 C2orf68Q2NKX9 166 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 OR2T2Q6IF00 324 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 CLEC18BQ6UXF7 455 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 TIPARPQ7Z3E1 657 aaKnown RBP10.81□□□□□ -0.68
COL20A1-201ENST00000358894 VPS25Q9BRG1 176 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 KCNIP1Q9NZI2 227 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 LOXL2Q9Y4K0 774 aa10.81□□□□□ -0.68
COL20A1-201ENST00000358894 A0A1W2PPH5 198 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 CD300LBA8K4G0 201 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 RAB27BO00194 218 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 CYB5BO43169 146 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 SFT2D2O95562 160 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 TFAP2EQ6VUC0 442 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 MAGT1Q9H0U3 335 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 DUSP15Q9H1R2 295 aaPredicted RBP10.8□□□□□ -0.68
COL20A1-201ENST00000358894 PHF3Q92576 2039 aaKnown RBP10.8□□□□□ -0.68
COL20A1-201ENST00000358894 CRHP06850 196 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 ZNF25P17030 456 aaPredicted RBP10.8□□□□□ -0.68
COL20A1-201ENST00000358894 TMEM268Q5VZI3 342 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 OR2A2Q6IF42 318 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 APH1AQ96BI3 265 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 NPDC1Q9NQX5 325 aaPredicted RBP10.8□□□□□ -0.68
COL20A1-201ENST00000358894 IGKV3D-11A0A0A0MRZ8 115 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 FAM157BP0CG42 384 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 MLF1P58340 268 aa10.8□□□□□ -0.68
COL20A1-201ENST00000358894 PJVKQ0ZLH3 352 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms