RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 WDR73Q6P4I2 378 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A1W2PRD5 423 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A1W2PRF3 423 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A1W2PRM7 423 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ISG20L2Q9H9L3 353 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PLA2G3Q9NZ20 509 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TMED3Q9Y3Q3 217 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A087WUJ7 227 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ALG1L2C9J202 215 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CSN3P07498 182 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 RNASE1P07998 156 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 GPX2P18283 190 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 RFESDQ8TAC1 157 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CST2P09228 141 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MDH2P40926 338 aaKnown RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CLDN20P56880 219 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ID4P47928 161 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TBC1D26Q86UD7 250 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 KLHDC9Q8NEP7 349 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 OR8B3Q8NGG8 313 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 IL22RA2Q969J5 263 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 OR8B2Q96RD0 313 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MTCH2Q9Y6C9 303 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 AUNIPQ9H7T9 357 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ANXA10Q9UJ72 324 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MFNGO00587 321 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ADIPOQQ15848 244 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SSX1Q16384 188 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 NHLRC1Q6VVB1 395 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PAQR9Q6ZVX9 377 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SYS1Q8N2H4 156 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 A0A1W2PR80 420 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TMIGD3P0DMS9 266 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 OR2I1PQ8NGU4 316 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 FAM210BQ96KR6 192 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 NPAS1Q99742 590 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 GABARAPL3Q9BY60 117 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 IL21Q9HBE4 155 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 KCNMB2Q9Y691 235 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SMAGPQ0VAQ4 97 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 SP6Q3SY56 376 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ZDHHC22Q8N966 263 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CLRN3Q8NCR9 226 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 PACRGQ96M98 296 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ERRFI1Q9UJM3 462 aaPredicted RBP5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 TRAV20A0A0B4J274 112 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 IGHV3-13P01766 116 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 IGHV3-7P01780 117 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 MMP15P51511 669 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 CCR5P51681 352 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 GFERP55789 205 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 ZMIZ1Q9ULJ6 1067 aa5.18□□□□□ -1.58
SRGAP1-201ENST00000355086 IGLV3-10A0A075B6K4 115 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 GNG7O60262 68 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 ZNF26P17031 533 aaPredicted RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 UQCRFS1P47985 274 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 DLEU7Q6UYE1 221 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 CCL4L1Q8NHW4 92 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 PRR7Q8TB68 274 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 MS4A10Q96PG2 267 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 TMUB1Q9BVT8 246 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 NAA60Q9H7X0 242 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 PCOLCE2Q9UKZ9 415 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 FAM208AQ9UK61 1670 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 LYZL6O75951 148 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 RRN3P1Q2M238 152 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM215Q68D42 235 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 FLYWCH2Q96CP2 140 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 SHISA4Q96DD7 197 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 TMEM140Q9NV12 185 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 KLK11Q9UBX7 282 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 UPK1AO00322 258 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 GP2P55259 537 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 TNXAQ16473 311 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 NUFIP2Q7Z417 695 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 ABHD14AQ9BUJ0 271 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 VSIG4Q9Y279 399 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 KLF7O75840 302 aaPredicted RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 ACTL6AO96019 429 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 B2MP61769 119 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 CADM3Q8N126 398 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 KTI12Q96EK9 354 aaPredicted RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 TRAV1-2A0A0B4J238 106 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 FGF8P55075 233 aaPredicted RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 UBE2L3P68036 154 aaKnown RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 WIPI1Q5MNZ9 446 aaPredicted RBP5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 UQCC3Q6UW78 93 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 RIGQ13278 110 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 FBXL6Q8N531 539 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 RAB1CQ92928 201 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 SOCS7O14512 581 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 CD96P40200 585 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 KIR3DL2P43630 455 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 SLC25A30Q5SVS4 291 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 OR1N2Q8NGR9 330 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 VSTM2AQ8TAG5 236 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 ARHGAP5-AS1Q96IT6 56 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 CES1P1Q9UKY3 287 aa5.17□□□□□ -1.58
SRGAP1-201ENST00000355086 MMP24Q9Y5R2 645 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms