RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 H3F3CQ6NXT2 135 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 CPNE4Q96A23 557 aaPredicted RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 NOSIPQ9Y314 301 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-202ENST00000343765 CACNA1HO95180 2353 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 LNP1A1A4G5 178 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF587BE7ETH6 402 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 APOC3P02656 99 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CCL2P13500 99 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CNR1P21554 472 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 PRKACBP22694 351 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 FAM3AP98173 230 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 LINC00696Q6ZRV3 163 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 TMEM200AQ86VY9 491 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 FBXL14Q8N1E6 418 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ZBTB44Q8NCP5 570 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 PIK3IP1Q96FE7 263 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CMSS1Q9BQ75 279 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 BOKQ9UMX3 212 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 MED13Q9UHV7 2174 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DNAJC13O75165 2243 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 FREM1Q5H8C1 2179 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 A0A1B0GW55 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 A0A1W2PNU3 283 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF850A8MQ14 1090 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CYTIPO60759 359 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L2P0CJ85 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L3P0CJ86 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L4P0CJ87 422 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L5P0CJ88 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L6P0CJ89 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4L7P0CJ90 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 PAN3Q58A45 887 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CALHM2Q9HA72 323 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 DUX4Q9UBX2 424 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ANXA10Q9UJ72 324 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 TEX13DA0A0J9YY54 714 aaPredicted RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 MRPL33O75394 65 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 OR5H8P0DN80 308 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 EDN3P14138 238 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ITGA3P26006 1051 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 FXYD4P59646 89 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ARL6IP1Q15041 203 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CPEB3Q8NE35 698 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 CCDC54Q8NEL0 328 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 LIME1Q9H400 295 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 OR2S2Q9NQN1 319 aa12.92□□□□□ -0.34
VIPAS39-202ENST00000343765 hCG_38984A0A1B0GV85 526 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 LOC105371267A0A1B0GV96 52 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 NEURL1O76050 574 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 FARS2O95363 451 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 IFNA2P01563 188 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 RBMXP38159 391 aaKnown RBP12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 PCBD1P61457 104 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 LHFPL2Q6ZUX7 228 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 OR2M7Q8NG81 312 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 OR10AD1Q8NGE0 317 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 SHARPINQ9H0F6 387 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 SLC6A15Q9H2J7 730 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 SLC7A10Q9NS82 523 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 GLI4P10075 376 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 MAGEA5P43359 124 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 AKR1C2P52895 323 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 OR1S2Q8NGQ3 325 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 PHYHIPLQ96FC7 376 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 PCDHB10Q9UN67 800 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 ST3GAL6Q9Y274 331 aa12.91□□□□□ -0.34
VIPAS39-202ENST00000343765 FCGR3AP08637 254 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 ARF1P84077 181 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 C3AR1Q16581 482 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 RIPPLY2Q5TAB7 128 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 RTL6Q6ICC9 239 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 ZNF585AQ6P3V2 769 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 ATRAIDQ6UW56 229 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 TUSC5Q8IXB3 177 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 CPNE2Q96FN4 548 aaPredicted RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 C2orf50Q96LR7 162 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 NBEAQ8NFP9 2946 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 HLA-HP01893 362 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 TPT1P13693 172 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 SPINK2P20155 84 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 CHATP28329 748 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 AIMP2Q13155 320 aaKnown RBP12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 SP6Q3SY56 376 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 PRSS54Q6PEW0 395 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 OSR2Q8N2R0 312 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 POC1AQ8NBT0 407 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
VIPAS39-202ENST00000343765 FNDC9Q8TBE3 224 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms