RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RFLNBQ8N5W9 214 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 GALMQ96C23 342 aa4.26□□□□□ -1.73
CSMD3-203ENST00000343508 PTRH2Q9Y3E5 179 aaKnown RBP4.26□□□□□ -1.73
CSMD3-203ENST00000343508 DUXBA0A1W2PPF3 345 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ALG1L2C9J202 215 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 H0Y8X5 98 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 NXPH2O95156 264 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TCTEX1D1Q8N7M0 179 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MCHR2Q969V1 340 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GAS2L1Q99501 681 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 DOCK3Q8IZD9 2030 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TNFSF14O43557 240 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SOX15O60248 233 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GLI4P10075 376 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ERVFC1-1P60608 527 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 LSM6P62312 80 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF90Q03938 601 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 BSXQ3C1V8 233 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 M1APQ8TC57 530 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 POM121Q96HA1 1249 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 WFDC6Q9BQY6 131 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 PPP1R3CQ9UQK1 317 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CASP8AP2Q9UKL3 1982 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 WDR1O75083 606 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 RECKO95980 971 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ACAA2P42765 397 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CLDN15P56746 228 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 IL24Q13007 206 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 COL19A1Q14993 1142 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TBC1D28Q2M2D7 210 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 PRAMEF20Q5VT98 475 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 C20orf196Q8IYI0 205 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ADPRHL1Q8NDY3 354 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 STRADBQ9C0K7 418 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ADAM20O43506 726 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 HYAL3O43820 417 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 OR2J2O76002 312 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CDS2O95674 445 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 FAHP16930 419 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 EWSR1Q01844 656 aaKnown RBP eCLIP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ATP6V1FQ16864 119 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 AAED1Q7RTV5 226 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ACY3Q96HD9 319 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 KCNK15Q9H427 330 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF814B7Z6K7 855 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SPINT2O43291 252 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SEMA7AO75326 666 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 APOA2P02652 100 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CISD3P0C7P0 127 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GCH1P30793 250 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CCR5P51681 352 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TAS2R45P59539 299 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TAS2R60P59551 318 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ZNF92Q03936 586 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SLC10A1Q14973 349 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 KCNE4Q8WWG9 221 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TMEM37Q8WXS4 190 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 BADQ92934 168 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MEGF10Q96KG7 1140 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SLC2A9Q9NRM0 540 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MBD1Q9UIS9 605 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 H3BP45 60 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MGST1P10620 155 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 LSRQ86X29 649 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SLC26A1Q9H2B4 701 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 LHX9Q9NQ69 397 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GSN-AS1Q9NRJ2 163 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 FGF21Q9NSA1 209 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 BOKQ9UMX3 212 aaPredicted RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 PLXND1Q9Y4D7 1925 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 UBE2CO00762 179 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MPPED1O15442 326 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CFIP05156 583 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GUSBP08236 651 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CT62P0C5K7 136 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MDH2P40926 338 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 KRTDAPP60985 99 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 OR8G1Q15617 311 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 C19orf35Q6ZS72 473 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 VN1R4Q7Z5H5 301 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 MRGPRGQ86SM5 289 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 OR8B12Q8NGG6 310 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 HINT2Q9BX68 163 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 ANGPTL4Q9BY76 406 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 TPSD1Q9BZJ3 242 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 GPR132Q9UNW8 380 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 OR2M5A3KFT3 312 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 PGA4P0DJD7 388 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 PGA5P0DJD9 388 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 HKR1P10072 659 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 FUT3P21217 361 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 DDTP30046 118 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 DRD3P35462 400 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 SRP14P37108 136 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 CNN1P51911 297 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 UPK3AO75631 287 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 HSPB1P04792 205 aaKnown RBP4.25□□□□□ -1.73
CSMD3-203ENST00000343508 DANCRP0C864 163 aa4.25□□□□□ -1.73
CSMD3-203ENST00000343508 RPL29P47914 159 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms