RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 WDR13Q9H1Z4 485 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 RCL1Q9Y2P8 373 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 TRBV5-7A0A0A0MS05 114 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 A0A1B0GTQ1 180 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 A0A1W2PP11 408 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 RAB27BO00194 218 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 SH2D1BO14796 132 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 IAPPP10997 89 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 IL11P20809 199 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 TMEM33P57088 247 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 EGR4Q05215 589 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 GUK1Q16774 197 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 EIF2S3LQ2VIR3 472 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF426Q9BUY5 554 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 PECRQ9BY49 303 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 MS4A7Q9GZW8 240 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 SHARPINQ9H0F6 387 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF705FA8MVS1 300 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 C17orf112F2Z3M2 114 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 H7BYZ3 331 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 TO15178 435 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF705DP0CH99 300 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF705BP0CI00 300 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 IL9P15248 144 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR2T2Q6IF00 324 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 FAM173AQ9BQD7 235 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 SERTAD4Q9NUC0 356 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 RNF150Q9ULK6 438 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ABCA7Q8IZY2 2146 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 TMEM218A2RU14 115 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 OR2C1O95371 312 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 CTSDP07339 412 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 GNG3P63215 75 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF658BQ4V348 819 aaPredicted RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 MIDNQ504T8 468 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 C1orf100Q5SVJ3 147 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 H2BFWTQ7Z2G1 175 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNRF4Q8WWF5 429 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 ZNF385AQ96PM9 386 aaKnown RBP6.35□□□□□ -1.39
VCAN-202ENST00000342785 KCNK7Q9Y2U2 307 aa6.35□□□□□ -1.39
VCAN-202ENST00000342785 FSTP19883 344 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 PSMB3P49720 205 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 DHODHQ02127 395 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 TSPO2Q5TGU0 170 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 SLC38A6Q8IZM9 456 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 OR2M3Q8NG83 312 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 NAA60Q9H7X0 242 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ZNF727A8MUV8 499 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 OR5AC1P0C628 307 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 RPS4XP62701 263 aaKnown RBP6.34□□□□□ -1.39
VCAN-202ENST00000342785 OR1C1Q15619 314 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 MOGAT2Q3SYC2 334 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 FAM219AQ8IW50 185 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ZNF610Q8N9Z0 462 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ADIPOR1Q96A54 375 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 MRPS24Q96EL2 167 aaKnown RBP6.34□□□□□ -1.39
VCAN-202ENST00000342785 TECTBQ96PL2 329 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ARRDC1-AS1Q9H2J1 176 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 RASL12Q9NYN1 266 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 GPR160Q9UJ42 338 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 RLFQ13129 1914 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ZP4Q12836 540 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 PRAMEF5Q5TYX0 476 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
VCAN-202ENST00000342785 PRAMEF6Q5VXH4 476 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ERRFI1Q9UJM3 462 aaPredicted RBP6.34□□□□□ -1.39
VCAN-202ENST00000342785 KLK13Q9UKR3 277 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 TIMM8BQ9Y5J9 83 aaPredicted RBP6.34□□□□□ -1.39
VCAN-202ENST00000342785 FAM24AA6NFZ4 105 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 SLC22A20A6NK97 555 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 TNFSF15O95150 251 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 CASP6P55212 293 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 HTD2P86397 168 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 HPSE2Q8WWQ2 592 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 SARAFQ96BY9 339 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 ZPBPQ9BS86 351 aa6.34□□□□□ -1.39
VCAN-202ENST00000342785 PRDX4Q13162 271 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 SLC25A45Q8N413 288 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 COMMD1Q8N668 190 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 DEFB123Q8N688 67 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 RGP1Q92546 391 aaPredicted RBP6.34□□□□□ -1.4
VCAN-202ENST00000342785 TAAR9Q96RI9 348 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 KCNK17Q96T54 332 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 MMP26Q9NRE1 261 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 TNFSF18Q9UNG2 199 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 GAB2Q9UQC2 676 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 MED19A0JLT2 244 aaPredicted RBP6.34□□□□□ -1.4
VCAN-202ENST00000342785 TGFBR3LH3BV60 316 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 MASP2O00187 686 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 TERTO14746 1132 aaKnown RBP6.34□□□□□ -1.4
VCAN-202ENST00000342785 ONECUT2O95948 504 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 IGKV3-11P04433 115 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 CCL2P13500 99 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 ACKR3P25106 362 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 NFYBP25208 207 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 OR2C3Q8N628 320 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 DEFB108BQ8NET1 73 aa6.34□□□□□ -1.4
VCAN-202ENST00000342785 OR11L1Q8NGX0 322 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms