RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 E5RGE8 158 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 IL11P20809 199 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 FAM27BQ5VT28 67 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 CDCP2Q5VXM1 449 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 ZNF441Q8N8Z8 693 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 CORO2AQ92828 525 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 FYTTD1Q96QD9 318 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 GAL3ST2Q9H3Q3 398 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 NSG2Q9Y328 171 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 THSD7BQ9C0I4 1608 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 TRAV38-1A0A0B4J264 116 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 MASP2O00187 686 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 IGKV3-11P04433 115 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 FPR2P25090 351 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 LIMS1P48059 325 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 ATP1A1-AS1Q5TC04 95 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 MDP1Q86V88 176 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 PLPPR2Q96GM1 343 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 DSPPQ9NZW4 1301 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 RPS4Y1P22090 263 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 ZNF816Q0VGE8 651 aaPredicted RBP17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 GUCD1Q96NT3 240 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 KCNE5Q9UJ90 142 aa17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 STRAPQ9Y3F4 350 aaKnown RBP17.24■□□□□ 0.35
SEMA6C-201ENST00000341697 PRR33A8MZF0 331 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 SNAPINO95295 136 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ZNF251Q9BRH9 671 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 PLEKHA2Q9HB19 425 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 TINAGQ9UJW2 476 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 F6UZH7 168 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 PPT1P50897 306 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ACOT7LQ6ZUV0 252 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ZPLD1Q8TCW7 415 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 SSX3Q99909 188 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 OR10AD1Q8NGE0 317 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 MRPS18AQ9NVS2 196 aaKnown RBP17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ADAM20O43506 726 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 NUBP1P53384 320 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ERRFI1Q9UJM3 462 aaPredicted RBP17.23■□□□□ 0.35
SEMA6C-201ENST00000341697 ASXL3Q9C0F0 2248 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 JTBO76095 146 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 TXNDC12O95881 172 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 P2RY6Q15077 328 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 SLC25A40Q8TBP6 338 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 BOLA1Q9Y3E2 137 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 FAM186AA6NE01 2351 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 PYCARD-AS1I3L0S3 204 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 GLCCI1Q86VQ1 547 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 FRZBQ92765 325 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 YIF1AO95070 293 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 GGTLC2Q14390 218 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 IGFBP7Q16270 282 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 THNSL2Q86YJ6 484 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 ZDHHC22Q8N966 263 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 SNRNP70P08621 437 aaKnown RBP17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 IAPPP10997 89 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 ELLP55199 621 aaPredicted RBP17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 MS4A5Q9H3V2 200 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 SAP30LQ9HAJ7 183 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 OR6C3Q9NZP0 311 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 PIKFYVEQ9Y2I7 2098 aa17.22■□□□□ 0.35
SEMA6C-201ENST00000341697 GABRA4P48169 554 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 VMA21Q3ZAQ7 101 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 PXT1Q8NFP0 134 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 OR10AC1Q8NH08 325 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 GPX7Q96SL4 187 aaPredicted RBP17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 RPL12P30050 165 aaKnown RBP17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 RAB7AP51149 207 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 CDH26Q8IXH8 852 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 GNG10P50151 68 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 SLC7A5P1Q8MH63 180 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 CMTM2Q8TAZ6 248 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 SCAF4O95104 1147 aaKnown RBP17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 IRF3Q14653 427 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 LYG1Q8N1E2 194 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 GNPNAT1Q96EK6 184 aaPredicted RBP17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 OCEL1Q9H607 264 aa17.21■□□□□ 0.35
SEMA6C-201ENST00000341697 CDIPTO14735 213 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 SEMG1P04279 462 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 RPEQ96AT9 228 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 SLC7A10Q9NS82 523 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 PSENENQ9NZ42 101 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 NDUFB6O95139 128 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 IL5P05113 134 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 OR52B4Q8NGK2 314 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 SCARB1Q8WTV0 552 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 ASB13Q8WXK3 278 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 DEFB108AA8MXU0 73 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 GMDSO60547 372 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 PLA1AQ53H76 456 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 ZNF574Q6ZN55 896 aaPredicted RBP17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 POC1BQ8TC44 478 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 PINX1Q96BK5 328 aaKnown RBP17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 MAGT1Q9H0U3 335 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 PSG11Q9UQ72 335 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 C1orf196B1AJZ1 125 aa17.2■□□□□ 0.34
SEMA6C-201ENST00000341697 LALBAP00709 142 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms