RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 CHCHD3Q9NX63 227 aaKnown RBP18.61■□□□□ 0.57
PBX1-201ENST00000340699 RFPL4AA6NLU0 287 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 RFPL4AL1F8VTS6 287 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 SELLP14151 372 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 ATF1P18846 271 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 BPIFB3P59826 476 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 CMTM4Q8IZR5 234 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 TMEM185AQ8NFB2 350 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 SDSLQ96GA7 329 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 NRIP2Q9BQI9 281 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 DCTN5Q9BTE1 182 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 NEK6Q9HC98 313 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 ZNF222Q9UK12 451 aa18.6■□□□□ 0.57
PBX1-201ENST00000340699 CAB39Q9Y376 341 aaPredicted RBP18.6■□□□□ 0.57
PBX1-201ENST00000340699 EXOSC1Q9Y3B2 195 aaKnown RBP18.6■□□□□ 0.57
PBX1-201ENST00000340699 TRBV2A0A0J9YWF9 115 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 E9PI62 339 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 SLC1A7O00341 560 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 CYB5AP00167 134 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 PLATP00750 562 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 SFTPBP07988 381 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 PRDX2P32119 198 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 ETV1P50549 477 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 CAPZA1P52907 286 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 CAV3P56539 151 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 PDCD1Q15116 288 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 BCL6BQ8N143 479 aaPredicted RBP18.59■□□□□ 0.57
PBX1-201ENST00000340699 BATF2Q8N1L9 274 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 SIGLECL1Q8N7X8 197 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 ZNRF1Q8ND25 227 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 LY6G5BQ8NDX9 201 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 OR51A4Q8NGJ6 313 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 OR10AC1Q8NH08 325 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 TMEM80Q96HE8 168 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 SIRPDQ9H106 197 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 ONECUT1Q9UBC0 465 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 NKX1-2Q9UD57 310 aaPredicted RBP18.59■□□□□ 0.57
PBX1-201ENST00000340699 DIMT1Q9UNQ2 313 aaKnown RBP18.59■□□□□ 0.57
PBX1-201ENST00000340699 MAB21L2Q9Y586 359 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 KPTNQ9Y664 436 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 COL6A5A8TX70 2615 aa18.59■□□□□ 0.57
PBX1-201ENST00000340699 IGKV1-27A0A075B6S5 117 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 ZFPL1O95159 310 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 MMP9P14780 707 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 AZGP1P25311 298 aaKnown RBP18.58■□□□□ 0.56
PBX1-201ENST00000340699 MTCP1P56278 107 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 CCDC58Q4VC31 144 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 LHFPL2Q6ZUX7 228 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 C9orf139Q6ZV77 190 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 MKXQ8IYA7 352 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 ZNF561Q8N587 486 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 SPSB1Q96BD6 273 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 CEP19Q96LK0 163 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 TBX15Q96SF7 602 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 HES4Q9HCC6 221 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 OR14J1Q9UGF5 321 aa18.58■□□□□ 0.56
PBX1-201ENST00000340699 IGKV1-9A0A0C4DH69 117 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 A0A1W2PQ09 198 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 INMTO95050 263 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 GNAO1P09471 354 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 ERVK11-1P61568 191 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 RPL22L1Q6P5R6 122 aaKnown RBP18.57■□□□□ 0.56
PBX1-201ENST00000340699 SLC25A26Q70HW3 274 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 CD177Q8N6Q3 437 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 C8orf46Q8TAG6 207 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 TSEN15Q8WW01 171 aaKnown RBP18.57■□□□□ 0.56
PBX1-201ENST00000340699 GGHQ92820 318 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 SLAMF9Q96A28 289 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 OPALINQ96PE5 141 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 PDCD1LG2Q9BQ51 273 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 ZCCHC4Q9H5U6 513 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 MTCH1Q9NZJ7 389 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 DHDHQ9UQ10 334 aa18.57■□□□□ 0.56
PBX1-201ENST00000340699 EFCAB10A6NFE3 127 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 KNG1P01042 644 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 POU3F4P49335 361 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 GTF2A1P52655 376 aaPredicted RBP18.56■□□□□ 0.56
PBX1-201ENST00000340699 OR2G6Q5TZ20 316 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 BRD3OSQ6XYD6 125 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 SERPINA12Q8IW75 414 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 Q8IYB0 196 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 KIR3DL3Q8N743 410 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 OR5D14Q8NGL3 314 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 OR13C9Q8NGT0 318 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 LHX4Q969G2 390 aa18.56■□□□□ 0.56
PBX1-201ENST00000340699 ST3GAL4Q11206 333 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 BAMBIQ13145 260 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 FIP1L1Q6UN15 594 aaKnown RBP18.55■□□□□ 0.56
PBX1-201ENST00000340699 VMO1Q7Z5L0 202 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.55■□□□□ 0.56
PBX1-201ENST00000340699 ZDHHC22Q8N966 263 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 FAM216AQ8WUB2 273 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 GATAD2BQ8WXI9 593 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 TFAP2CQ92754 450 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 BABAM2Q9NXR7 383 aa18.55■□□□□ 0.56
PBX1-201ENST00000340699 CNOT2Q9NZN8 540 aaKnown RBP18.55■□□□□ 0.56
PBX1-201ENST00000340699 TRBV23-1A0A0A0MS06 115 aa18.54■□□□□ 0.56
PBX1-201ENST00000340699 CENPVL3A0A0U1RRI6 287 aa18.54■□□□□ 0.56
PBX1-201ENST00000340699 MT-ND2P03891 347 aa18.54■□□□□ 0.56
PBX1-201ENST00000340699 PIPP12273 146 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms