RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 IL19Q9UHD0 177 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 PAIP2BQ9ULR5 123 aaKnown RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CHD3Q12873 2000 aaKnown RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 RAI1Q7Z5J4 1906 aaPredicted RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 USP9YO00507 2555 aaPredicted RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 A6NLC8 198 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 FAM25AB3EWG3 89 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 FAM25CB3EWG5 89 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 FAM25GB3EWG6 89 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CDC14BO60729 498 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 HTR3BO95264 441 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 APOA1P02647 267 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 BCL3P20749 454 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 COL8A1P27658 744 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 ART1P52961 327 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 IFITM3Q01628 133 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CBX3Q13185 183 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 OR2W3Q7Z3T1 314 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 LRRC28Q86X40 367 aaPredicted RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CELF2-AS1Q8N7Q2 184 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 KCNG3Q8TAE7 436 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 DIRAS2Q96HU8 199 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 ABCG5Q9H222 651 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 CBLN4Q9NTU7 201 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 RBFOX1Q9NWB1 397 aaKnown RBP11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 IL36GQ9NZH8 169 aa11.29□□□□□ -0.6
GTF2F2-201ENST00000340473 KDM4BO94953 1096 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 MPIG6BO95866 241 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CD55P08174 381 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 TNFSF4P23510 183 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 AGAP6Q5VW22 663 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CNIH2Q6PI25 160 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 WDR82Q6UXN9 313 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 TMEM200AQ86VY9 491 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 PTX4Q96A99 478 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 DIRC2Q96SL1 478 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CST11Q9H112 138 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 MS4A5Q9H3V2 200 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 C1orf123Q9NWV4 160 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CYB5AP00167 134 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 MGMTP16455 207 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 RAB6AP20340 208 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 PMELP40967 661 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 GATA4P43694 442 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 ZNF45Q02386 682 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 ZNF181Q2M3W8 571 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 DTX2Q86UW9 622 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 MOGAT3Q86VF5 341 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 OR4M1Q8NGD0 313 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 CLEC4MQ9H2X3 399 aaPredicted RBP11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 POLDIP2Q9Y2S7 368 aa11.28□□□□□ -0.6
GTF2F2-201ENST00000340473 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 AKR7A2O43488 359 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 ZNF780AO75290 641 aaPredicted RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 UPK1BO75841 260 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 CSTBP04080 98 aaKnown RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 IZUMO1Q8IYV9 350 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 LPAR5Q9H1C0 372 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 ATG5Q9H1Y0 275 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 GCM1Q9NP62 436 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 LAMP3Q9UQV4 416 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 V9GYH0 126 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 A0A0A6YYD4 124 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 TPD52L2O43399 206 aaKnown RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 PGA5P0DJD9 388 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 GTF2F2P13984 249 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 CDK2P24941 298 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 PPOXP50336 477 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 GMFBP60983 142 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 TLE4Q04727 773 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 GPR176Q14439 515 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 FAM209AQ5JX71 171 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 ELP2Q6IA86 826 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 CDH24Q86UP0 819 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 RAB40AQ8WXH6 277 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 NRIP2Q9BQI9 281 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 SELENOIQ9C0D9 397 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 DECR2Q9NUI1 292 aa11.27□□□□□ -0.61
GTF2F2-201ENST00000340473 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms