RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 IL5P05113 134 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 MMP9P14780 707 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CYB561P49447 251 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CAMPP49913 170 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 SHBQ15464 509 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 CEACAM16Q2WEN9 425 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 TMEM196Q5HYL7 178 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 TMEM91Q6ZNR0 172 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 GPX8Q8TED1 209 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 FGF14Q92915 247 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 IL17BQ9UHF5 180 aa7.77□□□□□ -1.17
RTN3-202ENST00000339997 PARP14Q460N5 1801 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 IGHV3-43A0A0B4J1X8 118 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 C7orf77A4D0Y5 90 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 SOCS1O15524 211 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 EIF4E2O60573 245 aaKnown RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 IGHV3-43DP0DP04 118 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 FGF7P21781 194 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 B2MP61769 119 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 CLN3Q13286 438 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 CATSPERDQ86XM0 798 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 SFTPA2Q8IWL1 248 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 OR4C5Q8NGB2 326 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 SLC17A4Q9Y2C5 497 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 YTHDF2Q9Y5A9 579 aaKnown RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 TRAPPC1Q9Y5R8 145 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 WNK1Q9H4A3 2382 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 QSER1Q2KHR3 1735 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 ARRDC5A6NEK1 342 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 RCC1P18754 421 aaPredicted RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 APOBEC1P41238 236 aaKnown RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 HMGA2P52926 109 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 ELFN2Q5R3F8 820 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 DHRS7BQ6IAN0 325 aaPredicted RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 TUSC5Q8IXB3 177 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 MS4A10Q96PG2 267 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 NPAS1Q99742 590 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 ATP5SQ99766 215 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 POMT1Q9Y6A1 747 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 LTBP4Q8N2S1 1624 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 CIDEAO60543 219 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 SCGB1C2P0DMR2 95 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 DPTQ07507 201 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 MYBPHQ13203 477 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 Q6ZS52 159 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 ADPRHL1Q8NDY3 354 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 DYRK2Q92630 601 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
RTN3-202ENST00000339997 NAT8BQ9UHF3 227 aa7.76□□□□□ -1.17
RTN3-202ENST00000339997 CD160O95971 181 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 CST4P01036 141 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 CSN3P07498 182 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 PNLIPP16233 465 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 EIF1P41567 113 aaKnown RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 CSN1S1P47710 185 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 PTTG1IPP53801 180 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 CLDN15P56746 228 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 TMPRSS11FQ6ZWK6 438 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 CAMKMTQ7Z624 323 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 TMEM229BQ8NBD8 167 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 EXTL1Q92935 676 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 VAMP8Q9BV40 100 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 PBX4Q9BYU1 374 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 MRM2Q9UI43 246 aaKnown RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 STRAPQ9Y3F4 350 aaKnown RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 THSD7AQ9UPZ6 1657 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 KIF13BQ9NQT8 1826 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 FBLL1A6NHQ2 334 aaKnown RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 DHHO43323 396 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 ABCD3P28288 659 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 GPR12P47775 334 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 ZNF117Q03924 483 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 OR8G1Q15617 311 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 INPP5JQ15735 1006 aaPredicted RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 THEM4Q5T1C6 240 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 OSR2Q8N2R0 312 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 SLC35B3Q9H1N7 401 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 WDR13Q9H1Z4 485 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 TMPRSS5Q9H3S3 457 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 UBR3Q6ZT12 1888 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 DOPEY1Q5JWR5 2465 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 CELA2BP08218 269 aaPredicted RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 COX5AP20674 150 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 IL3RAP26951 378 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 FAM109BQ6ICB4 259 aaPredicted RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 TGIF2LXQ8IUE1 241 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 ZNF383Q8NA42 475 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 ADAD2Q8NCV1 583 aaKnown RBP7.75□□□□□ -1.17
RTN3-202ENST00000339997 OR11H4Q8NGC9 324 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 TMEM204Q9BSN7 226 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 SOX7Q9BT81 388 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 EDEM2Q9BV94 578 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 S1PR5Q9H228 398 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 SRD5A3Q9H8P0 318 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 FAM60AQ9NP50 221 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 MMP26Q9NRE1 261 aa7.75□□□□□ -1.17
RTN3-202ENST00000339997 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms