RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 LRRC75AQ8NAA5 344 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 ISL2Q96A47 359 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 ZNF346Q9UL40 294 aaKnown RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 IGHA1P01876 353 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 IGHA2P01877 340 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 HNRNPA1P09651 372 aaKnown RBP eCLIP11.56□□□□□ -0.56
USP47-202ENST00000339865 IVDP26440 423 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 DYNLT3P51808 116 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CACNG7P62955 275 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 STAC2Q6ZMT1 411 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 LIPGQ9Y5X9 500 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 UBR1Q8IWV7 1749 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 PPRC1Q5VV67 1664 aaKnown RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 PXDNQ92626 1479 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 TNFSF11O14788 317 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 ZNF749O43361 778 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 KIR2DL1P43626 348 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 KIR2DL2P43627 348 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 TCEAL1Q15170 157 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 TWIST1Q15672 202 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 BSXQ3C1V8 233 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 FBXO46Q6PJ61 603 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 NKAIN4Q8IVV8 208 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 VN1R1Q9GZP7 353 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 LTB4R2Q9NPC1 389 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 IL36GQ9NZH8 169 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 A0A1W2PPC4 97 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CA6P23280 308 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 IER3P46695 156 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SPATA45Q537H7 98 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CGB2Q6NT52 195 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 COL25A1Q9BXS0 654 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 ALOX12BO75342 701 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CDC20Q12834 499 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SIX1Q15475 284 aaPredicted RBP11.56□□□□□ -0.56
USP47-202ENST00000339865 SLC16A11Q8NCK7 471 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 PTX4Q96A99 478 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 CDRT15L2A8MXV6 281 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 UBE2L6O14933 153 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SMIM18P0DKX4 95 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 DLK1P80370 383 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SFTPA2Q8IWL1 248 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SFTPA1Q8IWL2 248 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 OR10G4Q8NGN3 311 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 OR10G9Q8NGN4 311 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 OR10G7Q8NGN6 311 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 ATOH8Q96SQ7 321 aa11.56□□□□□ -0.56
USP47-202ENST00000339865 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 TMEM38AQ9H6F2 299 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 MANBALQ9NQG1 85 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 SLC19A1P41440 591 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 TNFRSF4P43489 277 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 ZNF137PP52743 207 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 AWAT1Q58HT5 328 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 ZNF788Q6ZQV5 615 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 TCRBV16S1A1N1A0A5B0 115 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 CSNK1EP49674 416 aaKnown RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 LRRTM3Q86VH5 581 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 CXorf67Q86X51 503 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 TEX37Q96LM6 180 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 LPAR2Q9HBW0 351 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 TIMM10BQ9Y5J6 103 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 NWD2Q9ULI1 1742 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 EP300Q09472 2414 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 PGA3P0DJD8 388 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 CTU2Q2VPK5 515 aaKnown RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 LRRC10Q5BKY1 277 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 ACSM5Q6NUN0 579 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 OR2A5Q96R48 311 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 TRAF4Q9BUZ4 470 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 HINT3Q9NQE9 182 aaKnown RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 PRSS50Q9UI38 385 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 ANXA10Q9UJ72 324 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 POU3F3P20264 500 aaPredicted RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 APOBEC1P41238 236 aaKnown RBP11.55□□□□□ -0.56
USP47-202ENST00000339865 NTHL1P78549 312 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 FUT7Q11130 342 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 LEMD1Q68G75 181 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 C20orf27Q9GZN8 174 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 PBOV1Q9GZY1 135 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 TRAV8-7A0A075B6U6 113 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 BCL9O00512 1426 aa11.55□□□□□ -0.56
USP47-202ENST00000339865 C11orf94C9JXX5 98 aa11.54□□□□□ -0.56
USP47-202ENST00000339865 FCGR3BO75015 233 aa11.54□□□□□ -0.56
USP47-202ENST00000339865 RPS27P42677 84 aaKnown RBP11.54□□□□□ -0.56
USP47-202ENST00000339865 NUBPLQ8TB37 319 aa11.54□□□□□ -0.56
USP47-202ENST00000339865 ZNF418Q8TF45 676 aaPredicted RBP11.54□□□□□ -0.56
USP47-202ENST00000339865 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms