RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 ELL3Q9HB65 397 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 EHFQ9NZC4 300 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 MBD2Q9UBB5 411 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 WASF3Q9UPY6 502 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 A0A0D9SG52 128 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ADAP1O75689 374 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SCO1O75880 301 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SPDEFO95238 335 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 GLRA1P23415 457 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PTGER4P35408 488 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 TAS2R46P59540 309 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ATXN7L3Q14CW9 347 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PPA1Q15181 289 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SLC9A3R2Q15599 337 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 TAF9Q16594 264 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FIP1L1Q6UN15 594 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LINC00696Q6ZRV3 163 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RFPL4BQ6ZWI9 263 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 TUSC5Q8IXB3 177 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZSCAN4Q8NAM6 433 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SULT4A1Q9BR01 284 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PDCD10Q9BUL8 212 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PRDM14Q9GZV8 571 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 METTL9Q9H1A3 318 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 NARFLQ9H6Q4 476 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SDHAF2Q9NX18 166 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
CDK5RAP1-201ENST00000339269 A0A0B4J2A0 478 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 EEF1E1-BLOC1S5C9J1V9 151 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 BCL2L11O43521 198 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 OR2F2O95006 317 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PLATP00750 562 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 NRASP01111 189 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SFTPBP07988 381 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PRKACBP22694 351 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PCBD1P61457 104 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IL15RAQ13261 267 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 OR2F1Q13607 317 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 C3AR1Q16581 482 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PIGYQ3MUY2 71 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LHFPL2Q6ZUX7 228 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FNDC9Q8TBE3 224 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 DYRK2Q92630 601 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 VRK1Q99986 396 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FAAP24Q9BTP7 215 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 PRRG4Q9BZD6 226 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 BARX1Q9HBU1 254 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SHPKQ9UHJ6 478 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF391Q9UJN7 358 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 HSF4Q9ULV5 492 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LIPGQ9Y5X9 500 aa11.22□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 SS18L1O75177 396 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CRYZL1O95825 349 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ITGA3P26006 1051 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RBP2P50120 134 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 UBA52P62987 128 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 CNN3Q15417 329 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 BEX5Q5H9J7 111 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 NKAPLQ5M9Q1 402 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ATP1A1-AS1Q5TC04 95 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RELL2Q8NC24 303 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 NMES1Q9C002 83 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 FAM117AQ9C073 453 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 BCO1Q9HAY6 547 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ZNF701Q9NV72 531 aaPredicted RBP11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 RASL12Q9NYN1 266 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 IL36GQ9NZH8 169 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
CDK5RAP1-201ENST00000339269 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 A8MXK9 166 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 TEX46H3BTG2 121 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 NME2P1O60361 137 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 MRPL33O75394 65 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 TNFSF15O95150 251 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 SERPINA5P05154 406 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 NME2P22392 152 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 RRADP55042 308 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 PDZK1IP1Q13113 114 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 RSU1Q15404 277 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 PDSS1Q5T2R2 415 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 C9orf135Q5VTT2 229 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 ACOT7LQ6ZUV0 252 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 CALHM1Q8IU99 346 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 PXT1Q8NFP0 134 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 OR10AD1Q8NGE0 317 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 OR10C1Q96KK4 312 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 LINC00052Q96N35 136 aa11.21□□□□□ -0.62
CDK5RAP1-201ENST00000339269 S100A13Q99584 98 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms