RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 OR4M1Q8NGD0 313 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 OR5K1Q8NHB7 308 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 OR2T6Q8NHC8 308 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 RORBQ92753 470 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 ZNF488Q96MN9 340 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 PLEKHA1Q9HB21 404 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 C19orf12Q9NSK7 152 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 ENOPH1Q9UHY7 261 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 ZNF222Q9UK12 451 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 COPS3Q9UNS2 423 aa8.69□□□□□ -1.02
CAPN3-202ENST00000337571 TET2Q6N021 2002 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-202ENST00000337571 FAM230AA0A1W2PPH8 454 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 A6NIN4 97 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 DHRS7CA6NNS2 312 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 H3BUI4 141 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 SYNGR1O43759 233 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 SERPINA3P01011 423 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 TK1P04183 234 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 KRT8P05787 483 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 ATP6V1E1P36543 226 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 ERVFRD-1P60508 538 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 MFGE8Q08431 387 aaPredicted RBP8.68□□□□□ -1.02
CAPN3-202ENST00000337571 HERPUD1Q15011 391 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 GDPD3Q7L5L3 318 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 CALHM1Q8IU99 346 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 GID4Q8IVV7 300 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 YIPF7Q8N8F6 280 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 TMEM163Q8TC26 289 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 IL4I1Q96RQ9 567 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 NPFFR1Q9GZQ6 430 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 CLN6Q9NWW5 311 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 V9GYS6 101 aa8.68□□□□□ -1.02
CAPN3-202ENST00000337571 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 EBAG9O00559 213 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 SYT7O43581 403 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 PEX14O75381 377 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 RPP14O95059 124 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 TSPAN15O95858 294 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 CHRM2P08172 466 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 COX7A1P24310 79 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 CEBPDP49716 269 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 RASSF2P50749 326 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ODF4Q2M2E3 257 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 HCP5Q6MZN7 132 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 BCDIN3DQ7Z5W3 292 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ANGPTL5Q86XS5 388 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ZDHHC13Q8IUH4 622 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ASCC1Q8N9N2 400 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 OR13D1Q8NGV5 346 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 OR14K1Q8NGZ2 314 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 PPP1R35Q8TAP8 253 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 TRMT10AQ8TBZ6 339 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 C17orf50Q8WW18 174 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 UTP4Q969X6 686 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 NKX3-1Q99801 234 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 NRIP2Q9BQI9 281 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 PKIBQ9C010 78 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 RANBP3Q9H6Z4 567 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ADGRL4Q9HBW9 690 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 ABCB10Q9NRK6 738 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 WARS2Q9UGM6 360 aaKnown RBP8.67□□□□□ -1.02
CAPN3-202ENST00000337571 SLC22A13Q9Y226 551 aa8.67□□□□□ -1.02
CAPN3-202ENST00000337571 A0A0G2JK05 382 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 A0A1B0GTI1 187 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 ZAR1LA6NP61 321 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 PRR32B1ATL7 298 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 K7N7A8 449 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 SRSF10O75494 262 aaKnown RBP8.66□□□□□ -1.02
CAPN3-202ENST00000337571 GATBO75879 557 aaKnown RBP8.66□□□□□ -1.02
CAPN3-202ENST00000337571 CYB5AP00167 134 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 ARG1P05089 322 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 OR2T7P0C7T2 308 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 VSIG10L2P0DP72 767 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 PIPP12273 146 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-202ENST00000337571 CCL3L1P16619 93 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 FASP25445 335 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 FUT6P51993 359 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 EDDM3BP56851 147 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 COL10A1Q03692 680 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 IL24Q13007 206 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 AADACL4Q5VUY2 407 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 SLX4IPQ5VYV7 408 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 TMEM42Q69YG0 159 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 PLEKHG7Q6ZR37 379 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 C1QL4Q86Z23 238 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 EGFL6Q8IUX8 553 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 BATF2Q8N1L9 274 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 CCDC54Q8NEL0 328 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 MALSU1Q96EH3 234 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 TBX5Q99593 518 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 GLS2Q9UI32 602 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 MRM2Q9UI43 246 aaKnown RBP8.66□□□□□ -1.02
CAPN3-202ENST00000337571 PITPNC1Q9UKF7 332 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 SIGLEC9Q9Y336 463 aa8.66□□□□□ -1.02
CAPN3-202ENST00000337571 METTL15A6NJ78 407 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 C17orf98A8MV24 154 aa8.65□□□□□ -1.02
CAPN3-202ENST00000337571 M0R129 80 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms