RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CTDSPLO15194 276 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SYNGR4O95473 234 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 ARG1P05089 322 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 CHRM2P08172 466 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 OR5AC1P0C628 307 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 DUSP3P51452 185 aaPredicted RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 RAG2P55895 527 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SHBQ15464 509 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SVBPQ8N300 66 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SPICQ8N5J4 248 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 ARL6IP6Q8N6S5 226 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 LRRC75AQ8NAA5 344 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 RNF133Q8WVZ7 376 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 KCNJ16Q9NPI9 418 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 G6PC2Q9NQR9 355 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 NCOR2Q9Y618 2525 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 A0A0J9YW62 118 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 RPS10-NUDT3A0A1W2PQS6 291 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SMCO3A2RU48 225 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 CDRT15L2A8MXV6 281 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SSSCA1O60232 199 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 IFNA2P01563 188 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SERPINE2P07093 398 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 RPS10P46783 165 aaKnown RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 C4orf17Q53FE4 359 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 DHRS13Q6UX07 377 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 LYZL2Q7Z4W2 148 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 TMEM123Q8N131 208 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 BVESQ8NE79 360 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 MITD1Q8WV92 249 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 HGDQ93099 445 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 MRPL24Q96A35 216 aaKnown RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 RSRP1Q9BUV0 290 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SLCO5A1Q9H2Y9 848 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 PURGQ9UJV8 347 aaKnown RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 BORCS7-ASMTA0A0B4J1R7 106 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 A0A1W2PR77 199 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 ZFP92A6NM28 416 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SULT1C2O00338 296 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 OR2F2O95006 317 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 LY86O95711 162 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 RNF224P0DH78 156 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 CPN1P15169 458 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 IDH3GP51553 393 aaPredicted RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 MRPS34P82930 218 aaKnown RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 ZNF808Q8N4W9 903 aaPredicted RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 SFT2D1Q8WV19 159 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 NAT6Q93015 286 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 INTS12Q96CB8 462 aaKnown RBP7.23□□□□□ -1.25
HPS4-201ENST00000336873 LPAR5Q9H1C0 372 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 ARRDC1-AS1Q9H2J1 176 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 SPACA1Q9HBV2 294 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 PPP1R3CQ9UQK1 317 aa7.23□□□□□ -1.25
HPS4-201ENST00000336873 LINC00862A6NCI5 91 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 IAPPP10997 89 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 NR2C1P13056 603 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TESK1Q15569 626 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 PLPPR5Q32ZL2 321 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 SPINK9Q5DT21 86 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 PLAC9Q5JTB6 97 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 OR8G2PQ6IF36 304 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 CPT1CQ8TCG5 803 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 KCNK17Q96T54 332 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 EXOSC3Q9NQT5 275 aaKnown RBP7.22□□□□□ -1.25
HPS4-201ENST00000336873 DUSP13Q9UII6 198 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 CACNA1AO00555 2505 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 BCL2L11O43521 198 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TUSC2O75896 110 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TXNDC12O95881 172 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 CRHP06850 196 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 RFPL3SP0C7P2 107 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 ANOS1P23352 680 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 MMP16P51512 607 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 SRSF3P84103 164 aaKnown RBP7.22□□□□□ -1.25
HPS4-201ENST00000336873 OR2F1Q13607 317 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 COTL1Q14019 142 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 UBE2V2Q15819 145 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 ZNF260Q3ZCT1 412 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 NHLRC3Q5JS37 347 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 C9orf152Q5JTZ5 239 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 RAB11FIP2Q7L804 512 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 OR10D3Q8NH80 312 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 RFESDQ8TAC1 157 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 ZNF519Q8TB69 540 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 SYT3Q9BQG1 590 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 RHOFQ9HBH0 211 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 C1orf123Q9NWV4 160 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 MMP24Q9Y5R2 645 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TRBV5-7A0A0A0MS05 114 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 PMS2P1A4D2B8 440 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 DHRS7CA6NNS2 312 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 SIRPB1O00241 398 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TK1P04183 234 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 EPHA8P29322 1005 aaPredicted RBP7.22□□□□□ -1.25
HPS4-201ENST00000336873 S100GP29377 79 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 ELLP55199 621 aaPredicted RBP7.22□□□□□ -1.25
HPS4-201ENST00000336873 TAS2R31P59538 309 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 TAS2R46P59540 309 aa7.22□□□□□ -1.25
HPS4-201ENST00000336873 EIF5AP63241 154 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms