RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TMEM106AQ96A25 262 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 SEH1LQ96EE3 360 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 MMP26Q9NRE1 261 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 CKLFQ9UBR5 152 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 INSIG2Q9Y5U4 225 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 SIRT4Q9Y6E7 314 aaPredicted RBP13.16□□□□□ -0.3
MRPL55-202ENST00000336300 NF1P21359 2839 aa13.16□□□□□ -0.3
MRPL55-202ENST00000336300 SONP18583 2426 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 PNMA8CA0A1B0GUJ8 204 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 TRAPPC2LH3BP13 241 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 DVL1O14640 695 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 DENRO43583 198 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ENSAO43768 121 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 LALBAP00709 142 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 PLATP00750 562 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 CD1AP06126 327 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 POU3F4P49335 361 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 PPP3R1P63098 170 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ACSM1Q08AH1 577 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 MED22Q15528 200 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 Q499Y3 187 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 FIP1L1Q6UN15 594 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ACP7Q6ZNF0 438 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 PRSS48Q7RTY5 328 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ZFP41Q8N8Y5 198 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 ST8SIA4Q92187 359 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 CEP19Q96LK0 163 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 NRIP2Q9BQI9 281 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.3
MRPL55-202ENST00000336300 CTSZQ9UBR2 303 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
MRPL55-202ENST00000336300 IGKV1-27A0A075B6S5 117 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 IGHV2-70DA0A0C4DH43 119 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 KIR2DS1A0A191URI9 304 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 PSG2P11465 335 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 PDZK1IP1Q13113 114 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 IKZF1Q13422 519 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 ZNF788Q6ZQV5 615 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 MS4A15Q8N5U1 240 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 NANPQ8TBE9 248 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 SLAMF9Q96A28 289 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 ZNF488Q96MN9 340 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 GPER1Q99527 375 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 TMPRSS13Q9BYE2 586 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 PAK1IP1Q9NWT1 392 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-202ENST00000336300 GLS2Q9UI32 602 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 ABCA2Q9BZC7 2435 aa13.14□□□□□ -0.31
MRPL55-202ENST00000336300 ANK3Q12955 4377 aaKnown RBP13.13□□□□□ -0.31
MRPL55-202ENST00000336300 RFPL4AA6NLU0 287 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 RFPL4AL1F8VTS6 287 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 INMTO95050 263 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 KNG1P01042 644 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 MAPK3P27361 379 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-202ENST00000336300 PRDX2P32119 198 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 KISS1Q15726 138 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 BTN2A1Q7KYR7 527 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 ZNF561Q8N587 486 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 FAM216BQ8N7L0 139 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-202ENST00000336300 UFD1Q92890 307 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 PGLYRP3Q96LB9 341 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 YTHDF1Q9BYJ9 559 aaKnown RBP13.13□□□□□ -0.31
MRPL55-202ENST00000336300 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 HES4Q9HCC6 221 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 SLC25A10Q9UBX3 287 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-202ENST00000336300 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
MRPL55-202ENST00000336300 C2CD3Q4AC94 2353 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 IGKV1D-17A0A075B6S4 117 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 TRBV5-5A0A0J9YX44 114 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 HSMCR30P0CW71 290 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 NDUFB7P17568 137 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 CAPZA1P52907 286 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 PAX8Q06710 450 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 GPR50Q13585 617 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 IRF3Q14653 427 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 BATF2Q8N1L9 274 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 ZSCAN4Q8NAM6 433 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SGCDQ92629 289 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 EMG1Q92979 244 aaKnown RBP13.12□□□□□ -0.31
MRPL55-202ENST00000336300 RFT1Q96AA3 541 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 GAFA1Q96PS6 74 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SPACA5Q96QH8 159 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 SMURF1Q9HCE7 757 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 TAS2R4Q9NYW5 299 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 OR14J1Q9UGF5 321 aa13.12□□□□□ -0.31
MRPL55-202ENST00000336300 ZNF879B4DU55 563 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms