RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 HERVK_113P61574 105 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 BTG2P78543 158 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 SPATA45Q537H7 98 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CARFQ8N187 725 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 OTOSQ8NHW6 89 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 PTP4A1Q93096 173 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 TMEM147Q9BVK8 224 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 KCNE3Q9Y6H6 103 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 AKAP12Q02952 1782 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 LNP1A1A4G5 178 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 OR2T8A6NH00 312 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 CD22P20273 847 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 FUT3P21217 361 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 MDKP21741 143 aaPredicted RBP8.78□□□□□ -1
COL4A6-201ENST00000334504 BSGP35613 385 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 DEFB103AP81534 67 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 GVQW1Q8N7I0 195 aa8.78□□□□□ -1
COL4A6-201ENST00000334504 TNFSF11O14788 317 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 VAMP5O95183 116 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 GALP22466 123 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 TMEM52BQ4KMG9 183 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 ALKAL1Q6UXT8 129 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 RNF165Q6ZSG1 346 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 TMEM174Q8WUU8 243 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 PLPPR2Q96GM1 343 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 MBNL1Q9NR56 388 aaKnown RBP8.77□□□□□ -1
COL4A6-201ENST00000334504 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.77□□□□□ -1
COL4A6-201ENST00000334504 OR6C3Q9NZP0 311 aa8.77□□□□□ -1
COL4A6-201ENST00000334504 ZNF256Q9Y2P7 627 aaPredicted RBP8.77□□□□□ -1
COL4A6-201ENST00000334504 A0A1B0GX78 115 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 ASPDHA6ND91 283 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 IDSB3KWA1 339 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 SRP14P37108 136 aaKnown RBP8.77□□□□□ -1.01
COL4A6-201ENST00000334504 P2RY1P47900 373 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FUT7Q11130 342 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FOXO1Q12778 655 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 ZADH2Q8N4Q0 377 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 MS4A3Q96HJ5 214 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FGF21Q9NSA1 209 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 UFC1Q9Y3C8 167 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 LINC01553A4QN01 128 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 TLCD2A6NGC4 264 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 SCGB1A1P11684 91 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 HLA-GP17693 338 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 POLR2GP62487 172 aaKnown RBP eCLIP8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FNDC7Q5VTL7 733 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 METRNLQ641Q3 311 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 KIRREL2Q6UWL6 708 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 C16orf82Q7Z2V1 217 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FBXL14Q8N1E6 418 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 GMLQ99445 158 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 KCNK15Q9H427 330 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 A0A1B0GTL3 188 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 SNURFLB1AK76 121 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 MELTFP08582 738 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 CD40P25942 277 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 CYB561P49447 251 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 IL24Q13007 206 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 DEFB109BQ30KR1 87 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 ALKBH6Q3KRA9 238 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 ZNF343Q6P1L6 599 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 CA13Q8N1Q1 262 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 AGBL5Q8NDL9 886 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 MAFAQ8NHW3 353 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-201ENST00000334504 GDE1Q9NZC3 331 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 VAX2Q9UIW0 290 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 ERRFI1Q9UJM3 462 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-201ENST00000334504 NUMA1Q14980 2115 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 KLRC4-KLRK1H3BQV0 150 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 CORTO00230 105 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 DUSP2Q05923 314 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FZD2Q14332 565 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 CAMKMTQ7Z624 323 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FGF13Q92913 245 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 SLC6A13Q9NSD5 602 aa8.77□□□□□ -1.01
COL4A6-201ENST00000334504 FCGR3BO75015 233 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 OR1D5P58170 312 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 LEMD1Q68G75 181 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 C6orf201Q7Z4U5 140 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 NOXO1Q8NFA2 376 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 NAT6Q93015 286 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 CCL26Q9Y258 94 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 TMEM30CPA0ZSE6 113 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 DEFB108AA8MXU0 73 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 GSTZ1O43708 216 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 CDC14BO60729 498 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 GP1BAP07359 652 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 B4GALT1P15291 398 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 ZNF273Q14593 569 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 EXT1Q16394 746 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 TMEM215Q68D42 235 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 COL2A1P02458 1487 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SIGLEC5O15389 551 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 OR3A4PP47883 348 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 NMUP48645 174 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 CLDN15P56746 228 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 SIGLEC14Q08ET2 396 aa8.76□□□□□ -1.01
COL4A6-201ENST00000334504 RABEPKQ7Z6M1 372 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms