RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 WDTC1Q8N5D0 677 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ZNF519Q8TB69 540 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 NEIL1Q96FI4 390 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SLC35A4Q96G79 324 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 MAGT1Q9H0U3 335 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 BCL3P20749 454 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ZNF816Q0VGE8 651 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 OR1C1Q15619 314 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 NPWQ8N729 165 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ISOC2Q96AB3 205 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 LOC285556D6RIA3 1793 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 PLXNA3P51805 1871 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ZNF749O43361 778 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 KLF7O75840 302 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 HMGN2P05204 90 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CSN3P07498 182 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SPINT3P49223 89 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ROBO4Q8WZ75 1007 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 OR2A5Q96R48 311 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CSF3RQ99062 836 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SAP30LQ9HAJ7 183 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 COCHO43405 550 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CD46P15529 392 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 PRLHRP49683 370 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SLC17A4Q9Y2C5 497 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 MMACHCQ9Y4U1 282 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 EN2P19622 333 aaPredicted RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CXCL3P19876 107 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 GLRA1P23415 457 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CLEC18BQ6UXF7 455 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 TRMT61AQ96FX7 289 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 PRAMEF26H0Y7S4 382 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 IFITM2Q01629 132 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 MRPS24Q96EL2 167 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CPEB1Q9BZB8 566 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 SRD5A3Q9H8P0 318 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 RBP4P02753 201 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 ELAVL3Q14576 367 aaKnown RBP9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 TBC1D26Q86UD7 250 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 MRAP2Q96G30 205 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 EGLN2Q96KS0 407 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 KLK11Q9UBX7 282 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
SPTBN1-201ENST00000333896 CA2P00918 260 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 SELEP16581 610 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 FKBP2P26885 142 aaKnown RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 P2RY1P47900 373 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 AESQ08117 197 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TRMT12Q53H54 448 aaKnown RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 C17orf78Q8N4C9 275 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 PIK3IP1Q96FE7 263 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 FUT9Q9Y231 359 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 DEFB115Q30KQ5 88 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TMEM136Q6ZRR5 245 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 CD99L2Q8TCZ2 262 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TMEM262E9PQX1 116 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TAPBPO15533 448 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 WNT11O96014 354 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 NMUP48645 174 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 MYOZ3Q8TDC0 251 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 NEIL2Q969S2 332 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TMEM208Q9BTX3 173 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 MED13Q9UHV7 2174 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 A0A0J9YY10 115 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 ANKRD20A5PA0PJZ0 165 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 GEMIN2O14893 280 aaKnown RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 NID1P14543 1247 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 CLN3Q13286 438 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 FAAP20Q6NZ36 180 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 ADAMTS17Q8TE56 1095 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 NRIP2Q9BQI9 281 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 EGLN1Q9GZT9 426 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TUBA4BQ9H853 241 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 FBXO4Q9UKT5 387 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 HTR6P50406 440 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 CTSCP53634 463 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 DCAF7P61962 342 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 H1FOOQ8IZA3 346 aaPredicted RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 PLEKHB1Q9UF11 243 aaPredicted RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 GREB1LQ9C091 1923 aaPredicted RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 GUSBP08236 651 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 YRDCQ86U90 279 aaKnown RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 CDCP1Q9H5V8 836 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 INSL6Q9Y581 213 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 OR4C45A6NMZ5 311 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 RGS7BPQ6MZT1 257 aaPredicted RBP9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 PWWP2BQ6NUJ5 590 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TMEM64Q6YI46 380 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 DOK3Q7L591 496 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 TAS2R4Q9NYW5 299 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 INSL5Q9Y5Q6 135 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 KIAA1551Q9HCM1 1747 aa9.32□□□□□ -0.92
SPTBN1-201ENST00000333896 SLC17A2O00624 439 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms