RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DHRS7BQ6IAN0 325 aaPredicted RBP14.53□□□□□ -0.08
TPM1-203ENST00000317516 BRICD5Q6PL45 260 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 C10orf67Q8IYJ2 551 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 CD177Q8N6Q3 437 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 RORBQ92753 470 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 C10orf35Q96D05 121 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 FAM234AQ9H0X4 552 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 VPREB3Q9UKI3 123 aa14.53□□□□□ -0.08
TPM1-203ENST00000317516 ANGPTL7O43827 346 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 APOL3O95236 402 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 FUT6P51993 359 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 DLX1P56177 255 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 TAF9Q16594 264 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 KCTD20Q7Z5Y7 419 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 ANGPTL5Q86XS5 388 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 ZSCAN4Q8NAM6 433 aaPredicted RBP14.52□□□□□ -0.09
TPM1-203ENST00000317516 LINC01006Q8NI28 216 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 TRMT10AQ8TBZ6 339 aaKnown RBP14.52□□□□□ -0.09
TPM1-203ENST00000317516 HES4Q9HCC6 221 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 C19orf12Q9NSK7 152 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 OR14J1Q9UGF5 321 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 GNG8Q9UK08 70 aa14.52□□□□□ -0.09
TPM1-203ENST00000317516 SNTNA6NMZ2 147 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 TK1P04183 234 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 UBCP0CG48 685 aaKnown RBP14.51□□□□□ -0.09
TPM1-203ENST00000317516 MEDAGQ5VYS4 303 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 TMEM200BQ69YZ2 307 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 ZFP1Q6P2D0 407 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 CALHM1Q8IU99 346 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 PNKDQ8N490 385 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 BEND2Q8NDZ0 799 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 PYDC1Q8WXC3 89 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 MYCBPQ99417 103 aaPredicted RBP14.51□□□□□ -0.09
TPM1-203ENST00000317516 USE1Q9NZ43 259 aa14.51□□□□□ -0.09
TPM1-203ENST00000317516 TIMM23O14925 209 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 CHRM2P08172 466 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 LGALS4P56470 323 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 ERVK11-1P61568 191 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 ACTC1P68032 377 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 ACTA1P68133 377 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 UBE2V2Q15819 145 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 SLC25A30Q5SVS4 291 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 TMEM244Q5VVB8 128 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 OR4M1Q8NGD0 313 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 PP6455Q8WZ26 134 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 BORCS8Q96FH0 119 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 HRASLS5Q96KN8 279 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 CEP19Q96LK0 163 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 CITED1Q99966 193 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 CHST5Q9GZS9 411 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 C16orf95Q9H693 158 aa14.5□□□□□ -0.09
TPM1-203ENST00000317516 DAPL1A0PJW8 107 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 K7N7A8 449 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 M0QZ24 198 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 CLPXO76031 633 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 CYB5AP00167 134 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 ALPLP05186 524 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 CEBPDP49716 269 aaPredicted RBP14.49□□□□□ -0.09
TPM1-203ENST00000317516 ERVFRD-1P60508 538 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 SRSF4Q08170 494 aaKnown RBP14.49□□□□□ -0.09
TPM1-203ENST00000317516 CNN3Q15417 329 aaKnown RBP14.49□□□□□ -0.09
TPM1-203ENST00000317516 TP53I3Q53FA7 332 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 Q6ZSV7 163 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 MKXQ8IYA7 352 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 ASCC1Q8N9N2 400 aaKnown RBP14.49□□□□□ -0.09
TPM1-203ENST00000317516 MEGF9Q9H1U4 602 aa14.49□□□□□ -0.09
TPM1-203ENST00000317516 H3BSH0 61 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 TSPAN9O75954 239 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 RBP2P50120 134 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 ALDH3A2P51648 485 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 ATP1B3P54709 279 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 PROK1P58294 105 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 SNRPGP62308 76 aaKnown RBP14.48□□□□□ -0.09
TPM1-203ENST00000317516 COL10A1Q03692 680 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 ZNF85Q03923 595 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 AANATQ16613 207 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 OCLNQ16625 522 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 HCP5Q6MZN7 132 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 CCDC121Q6ZUS5 278 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 EGFL6Q8IUX8 553 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 Q8IYB0 196 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 ENTHD1Q8IYW4 607 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 BATF2Q8N1L9 274 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 PRSS35Q8N3Z0 413 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 DTX3Q8N9I9 347 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 DNAAF1Q8NEP3 725 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 RNFT2Q96EX2 444 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 MRPL48Q96GC5 212 aaKnown RBP14.48□□□□□ -0.09
TPM1-203ENST00000317516 SSX3Q99909 188 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 MTCH1Q9NZJ7 389 aa14.48□□□□□ -0.09
TPM1-203ENST00000317516 LOC107986453A0A1B0GWG9 222 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 EI24O14681 340 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 ENTPD6O75354 484 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 OCM2P0CE71 109 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 OCMP0CE72 109 aaPredicted RBP14.47□□□□□ -0.09
TPM1-203ENST00000317516 PRKACBP22694 351 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 ISL1P61371 349 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 KPNB1Q14974 876 aaKnown RBP14.47□□□□□ -0.09
TPM1-203ENST00000317516 SLC25A26Q70HW3 274 aa14.47□□□□□ -0.09
TPM1-203ENST00000317516 GDPD3Q7L5L3 318 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms