RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 M0R2Z0 102 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 MPC2O95563 127 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 OR10J1P30954 320 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 RAG2P55895 527 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 PAX5Q02548 391 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 RPL18Q07020 188 aaKnown RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 DUSP8Q13202 625 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 PPP1R1AQ13522 171 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 RAB32Q13637 225 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 MPPED2Q15777 294 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ZNF766Q5HY98 468 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 BHLHA9Q7RTU4 235 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TSEN54Q7Z6J9 526 aaKnown RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 STPG2Q8N412 459 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 C9orf62Q8N4C0 152 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 FKBP11Q9NYL4 201 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ING1Q9UK53 422 aaPredicted RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 A0A0G2JMZ2 1700 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 MYO18AQ92614 2054 aaKnown RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 C9orf170A2RU37 121 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 LINC00862A6NCI5 91 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 GPR37O15354 613 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 YIF1AO95070 293 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 HPP00738 406 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 NRASP01111 189 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ATF1P18846 271 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ZNF816Q0VGE8 651 aaPredicted RBP7.32□□□□□ -1.24
VPS41-202ENST00000310301 INSL4Q14641 139 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 PNLIPRP3Q17RR3 467 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 THEM4Q5T1C6 240 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 LYRM7Q5U5X0 104 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 ARIH2OSQ8N7S6 290 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TAAR6Q96RI8 345 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 SEC11CQ9BY50 192 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 LANCL2Q9NS86 450 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 DECR2Q9NUI1 292 aa7.32□□□□□ -1.24
VPS41-202ENST00000310301 TMEM127O75204 238 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 SLC37A1P57057 533 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 PLA1AQ53H76 456 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 BTNL3Q6UXE8 466 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 DPPA3Q6W0C5 159 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 MAML2Q8IZL2 1156 aaPredicted RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 DUSP18Q8NEJ0 188 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OR2Y1Q8NGV0 311 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 NTNG2Q96CW9 530 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 Q9N2K0 584 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OPN1MWP04001 364 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OPN1MW2P0DN77 364 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OPN1MW3P0DN78 364 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 CD96P40200 585 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ERHP84090 104 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 KLRB1Q12918 225 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OR8G1Q15617 311 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 UNQ6494/PRO21346Q6UXR6 183 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ZNF426Q9BUY5 554 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ZNF552Q9H707 407 aaPredicted RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 RNF24Q9Y225 148 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 RBBP6Q7Z6E9 1792 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 FOCADQ5VW36 1801 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 RBFOX3A6NFN3 312 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 FXYD1O00168 92 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 MASP2O00187 686 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 GEMIN2O14893 280 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 EIF4E2O60573 245 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 SFT2D2O95562 160 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 RPS16P62249 146 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 RHBDD2Q6NTF9 364 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 PRSS3P2Q8NHM4 247 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 A0A1W2PR48 441 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 K7ESF4 209 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 SLC17A2O00624 439 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 IGHV3-9P01782 118 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 APOBEC1P41238 236 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 LIMK1P53667 647 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 FGF8P55075 233 aaPredicted RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 RTL8BQ17RB0 113 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 C12orf73Q69YU5 71 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ACSM6Q6P461 480 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ARRDC1Q8N5I2 433 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OR2D3Q8NGH3 330 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 NUBPLQ8TB37 319 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 CHST6Q9GZX3 395 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 TCFL5Q9UL49 500 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 TRBV5-4A0A0C4DH59 114 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 IGHV5-10-1A0A0J9YXX1 117 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 A0A1W2PPE2 198 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 PRSS37A4D1T9 235 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 CRISP2P16562 243 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 GLRA1P23415 457 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ELOBQ15370 118 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 SSX1Q16384 188 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 NKG7Q16617 165 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 OR5C1Q8NGR4 320 aa7.31□□□□□ -1.24
VPS41-202ENST00000310301 C12orf49Q9H741 205 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms