RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 HIPK2Q9H2X6 1198 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 LIN7CQ9NUP9 197 aaKnown RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 MRPS18BQ9Y676 258 aaKnown RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR5B21A6NL26 309 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 ADAM11O75078 769 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 DHODHQ02127 395 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 BAXQ07812 192 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 TSPO2Q5TGU0 170 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR8G2PQ6IF36 304 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 CXorf67Q86X51 503 aaPredicted RBP10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 TTTY12Q9BZ98 90 aa10.05□□□□□ -0.8
PCDHGC3-201ENST00000308177 B8ZZF3 427 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 MASP2O00187 686 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 BCL2L11O43521 198 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SFT2D2O95562 160 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 HLA-DQB1P01920 261 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 TEX30Q5JUR7 227 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF468Q5VIY5 522 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GFRALQ6UXV0 394 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF574Q6ZN55 896 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GLRX2Q9NS18 164 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SLC39A9Q9NUM3 307 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 MPC1Q9Y5U8 109 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 TRGV8A0A0C4DH27 118 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 A0A1W2PNV4 684 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SSSCA1O60232 199 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SCGB2A1O75556 95 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 HPNP05981 417 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 FSTP19883 344 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 TAS2R30P59541 319 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM74A1Q5RGS3 127 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 NUFIP2Q7Z417 695 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMPRSS13Q9BYE2 586 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SAV1Q9H4B6 383 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 AKIRIN1Q9H9L7 192 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GABRA1P14867 456 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GPR12P47775 334 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 RPS4Y2Q8TD47 263 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 HGDQ93099 445 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF107Q9UII5 783 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 C17orf112F2Z3M2 114 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 MPGP29372 298 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 EIF2S3P41091 472 aaKnown RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 PPP1CBP62140 327 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 PRAMEF5Q5TYX0 476 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 C19orf48Q6RUI8 117 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 UNQ9370/PRO34162Q6UXP9 181 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR13G1Q8NGZ3 307 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 PTX4Q96A99 478 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 GALMQ96C23 342 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 PUS1Q9Y606 427 aaKnown RBP eCLIP10.04□□□□□ -0.8
PCDHGC3-201ENST00000308177 K7ESF4 209 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 TRAF3IP2O43734 574 aaPredicted RBP10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 ZNF83P51522 516 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 RAB11AP62491 216 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 AKR1C1Q04828 323 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR14K1Q8NGZ2 314 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 UBALD1Q8TB05 177 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 ENSAO43768 121 aaKnown RBP10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 SCCPDHQ8NBX0 429 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 CPEB3Q8NE35 698 aaKnown RBP10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR8U1Q8NH10 309 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 COL4A6Q14031 1691 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 LGALS8O00214 317 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 KITLGP21583 273 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 ALKBH6Q3KRA9 238 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 SPANXN5Q5MJ07 72 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMEM251Q8N6I4 163 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 OR2Z1Q8NG97 314 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 FBXW5Q969U6 566 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAM131CQ96AQ9 280 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 ANXA10Q9UJ72 324 aa10.03□□□□□ -0.8
PCDHGC3-201ENST00000308177 TMEM30CPA0ZSE6 113 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 BMP5P22003 454 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 HMGN3Q15651 99 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAHD2BQ6P2I3 314 aaPredicted RBP10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 C1orf87Q8N0U7 546 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 PIK3IP1Q96FE7 263 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 FAHD2AQ96GK7 314 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 WDR13Q9H1Z4 485 aa10.02□□□□□ -0.8
PCDHGC3-201ENST00000308177 TRBV5-7A0A0A0MS05 114 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 SHISA3A0PJX4 238 aa10.02□□□□□ -0.81
PCDHGC3-201ENST00000308177 ALDH3B1P43353 468 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms