RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 BRS3P32247 399 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 MMP16P51512 607 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 POC1BQ8TC44 478 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 GPX7Q96SL4 187 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF2Q9BSG1 426 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PTDSS2Q9BVG9 487 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 GMDSO60547 372 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 MED6O75586 246 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PRSS23O95084 383 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 APOBEC3AP31941 199 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SSX9Q7RTT3 188 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 OR10V1Q8NGI7 309 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 UBALD1Q8TB05 177 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SEH1LQ96EE3 360 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 OR2V2Q96R30 315 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 NPTNQ9Y639 398 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 PINLYPA6NC86 204 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 UPK1BO75841 260 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 OR5H8P0DN80 308 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SUB1P53999 127 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 NKX6-1P78426 367 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-202ENST00000306042 COMMD5Q9GZQ3 224 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 GNB4Q9HAV0 340 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 SSUH2Q9Y2M2 353 aa8.08□□□□□ -1.12
PTPRE-202ENST00000306042 A0A0G2JMP0 313 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PTTG1O95997 202 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 OR3A4PP47883 348 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 LIMS1P48059 325 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 GP2P55259 537 aaKnown RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 RAB11AP62491 216 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 AVPI1Q5T686 147 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 OR2W3Q7Z3T1 314 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ST6GALNAC3Q8NDV1 305 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 OR4M2Q8NGB6 313 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 DERL3Q96Q80 235 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 MS4A7Q9GZW8 240 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 RNF167Q9H6Y7 350 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 GOLGB1Q14789 3259 aaKnown RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 TMEM229AB2RXF0 380 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 SDCBPO00560 298 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 CLDN1O95832 211 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 FABP1P07148 127 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PSMB1P20618 241 aaKnown RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 FCGR2CP31995 323 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ETV6P41212 452 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PRSS45Q7RTY3 260 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF554Q86TJ5 538 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 CDH24Q86UP0 819 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 SHISA5Q8N114 240 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 LYG1Q8N1E2 194 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 OR52N4Q8NGI2 321 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 WFDC6Q9BQY6 131 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 KIAA1671Q9BY89 1806 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 EPXP11678 715 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 NAAAQ02083 359 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF85Q03923 595 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 OR52W1Q6IF63 320 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 LGI3Q8N145 548 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PCGF1Q9BSM1 259 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 A0A0B4J203 849 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 LRRC3CA6NJW4 275 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 GABARAPH6UMI1 98 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 TMEM127O75204 238 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PDCD6O75340 191 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 ZBTB25P24278 435 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 CALCRP30988 508 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 EGR4Q05215 589 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 CATSPERDQ86XM0 798 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 DTX1Q86Y01 620 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 PERPQ96FX8 193 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 SLC25A31Q9H0C2 315 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 MBD2Q9UBB5 411 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 SPRR3Q9UBC9 169 aa8.07□□□□□ -1.12
PTPRE-202ENST00000306042 HEATR5BQ9P2D3 2071 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 F2RL2O00254 374 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 RAMP1O60894 148 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 HAND1O96004 215 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 CD40P25942 277 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 RPS4XP62701 263 aaKnown RBP8.06□□□□□ -1.12
PTPRE-202ENST00000306042 IGFBP7Q16270 282 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 MRGPRDQ8TDS7 321 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 DCUN1D4Q92564 292 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 SLC25A21Q9BQT8 299 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-202ENST00000306042 SMAD7O15105 426 aaKnown RBP8.06□□□□□ -1.12
PTPRE-202ENST00000306042 OR8U9P0C7N5 309 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 COX5BP10606 129 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 KCNJ3P48549 501 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 AKR1C1Q04828 323 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 PNLIPRP3Q17RR3 467 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
PTPRE-202ENST00000306042 DBX2Q6ZNG2 339 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 CA10Q9NS85 328 aa8.06□□□□□ -1.12
PTPRE-202ENST00000306042 LIN7CQ9NUP9 197 aaKnown RBP8.06□□□□□ -1.12
PTPRE-202ENST00000306042 SPTBN1Q01082 2364 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms