RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ARL6IP1Q15041 203 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 CNN3Q15417 329 aaKnown RBP12.38□□□□□ -0.43
SDC2-201ENST00000302190 MIDNQ504T8 468 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 OR2B11Q5JQS5 317 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 MITD1Q8WV92 249 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 SPSB2Q99619 263 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 TLNRD1Q9H1K6 362 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 ABCA1O95477 2261 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 PKDREJQ9NTG1 2253 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 SSSCA1O60232 199 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 TIAF1O95411 115 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 IFNA5P01569 189 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 FHL1Q13642 323 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 CDCP2Q5VXM1 449 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 DRAM2Q6UX65 266 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 TMEM123Q8N131 208 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 EMG1Q92979 244 aaKnown RBP12.38□□□□□ -0.43
SDC2-201ENST00000302190 MSGN1A6NI15 193 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 ZFP92A6NM28 416 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 TSPAN2O60636 221 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 GSTP1P09211 210 aaKnown RBP12.38□□□□□ -0.43
SDC2-201ENST00000302190 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
SDC2-201ENST00000302190 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 AGBL5Q8NDL9 886 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 TGIF2Q9GZN2 237 aa12.38□□□□□ -0.43
SDC2-201ENST00000302190 HSPB2A8KAH6 182 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SYNGR4O95473 234 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 HPP00738 406 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 NRASP01111 189 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
SDC2-201ENST00000302190 MMP16P51512 607 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 RHEBQ15382 184 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SHBQ15464 509 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 HSPB2Q16082 182 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 CEACAM16Q2WEN9 425 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 PLXDC2Q6UX71 529 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 CMTM1Q8IZ96 169 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 C17orf78Q8N4C9 275 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 ARRDC1Q8N5I2 433 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 CCDC71LQ8N9Z2 235 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 DTWD2Q8NBA8 298 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 OR5AP2Q8NGF4 316 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 RASL10BQ96S79 203 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 PCDH15Q96QU1 1955 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 OR5AC1P0C628 307 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 NQO2P16083 231 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 TMEM33P57088 247 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 RHBDD1Q8TEB9 315 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
SDC2-201ENST00000302190 OCIAD1Q9NX40 245 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 LRFN1Q9P244 771 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SFT2D2O95562 160 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 TXNDC12O95881 172 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 UNC119Q13432 240 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 TGIF1Q15583 401 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 ZNF260Q3ZCT1 412 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 ZNF684Q5T5D7 378 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 CYB5R2Q6BCY4 276 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 SMCO4Q9NRQ5 59 aa12.37□□□□□ -0.43
SDC2-201ENST00000302190 A0A0U1RQK1 487 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 GPR37O15354 613 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 HLA-HP01893 362 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 CCL4P13236 92 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 MSX1P28360 303 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 NXPH1P58417 271 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 UBE2KP61086 200 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 SSBP1Q04837 148 aaKnown RBP12.36□□□□□ -0.43
SDC2-201ENST00000302190 GGNBP1Q5YKI7 109 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 JMJD6Q6NYC1 403 aaPredicted RBP12.36□□□□□ -0.43
SDC2-201ENST00000302190 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 MKXQ8IYA7 352 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 OR10C1Q96KK4 312 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 HINT2Q9BX68 163 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 LPAR5Q9H1C0 372 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 NECAP2Q9NVZ3 263 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 A0A1W2PR80 420 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 WNT16Q9UBV4 365 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 DCHS1Q96JQ0 3298 aa12.36□□□□□ -0.43
SDC2-201ENST00000302190 TRAV14DV4A0A0A6YYC5 116 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 TRAV39A0A0B4J263 110 aa12.35□□□□□ -0.43
SDC2-201ENST00000302190 PRF1P14222 555 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms