RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TMEM187Q14656 261 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ICAM4Q14773 271 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TMEM31Q5JXX7 168 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 GPR157Q5UAW9 335 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 BEND4Q6ZU67 534 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 C6orf201Q7Z4U5 140 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ZNF429Q86V71 674 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 OR14K1Q8NGZ2 314 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 M1APQ8TC57 530 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 MED12Q93074 2177 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 SLC46A1Q96NT5 459 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 SLC25A31Q9H0C2 315 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 SMDT1Q9H4I9 107 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 C5orf63A6NC05 138 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 A6NIZ1 184 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 MKRN2OSH3BPM6 223 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 ATP6V0CP27449 155 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 RGS19P49795 217 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 CASP6P55212 293 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 RAP1BP61224 184 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 HIST2H3PS2Q5TEC6 136 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TOMM40LQ969M1 308 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TBL1XR1Q9BZK7 514 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 TP53TG5Q9Y2B4 290 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 LHFPL6Q9Y693 200 aa9.53□□□□□ -0.88
ZNF558-201ENST00000301475 FAM221BA6H8Z2 402 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 E9PLN8 166 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 PHOX2AO14813 284 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF43P17038 809 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 GLIPR1P48060 266 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF121P58317 390 aaPredicted RBP9.52□□□□□ -0.89
ZNF558-201ENST00000301475 CHAF1BQ13112 559 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 OR8G1Q15617 311 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 C5orf24Q7Z6I8 188 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF248Q8NDW4 579 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 OR13D1Q8NGV5 346 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 SNX22Q96L94 193 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 KIAA1456Q9P272 454 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 HSF4Q9ULV5 492 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 DOCK8Q8NF50 2099 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 SCAF4O95104 1147 aaKnown RBP9.52□□□□□ -0.89
ZNF558-201ENST00000301475 IGKV3-11P04433 115 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 APODP05090 189 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 OR5H8P0DN80 308 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 COL9A1P20849 921 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 HSF1Q00613 529 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF542PQ5EBM4 170 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 GRINAQ7Z429 371 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 OR2G3Q8NGZ4 309 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 OR5R1Q8NH85 324 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 CA5BP1Q8WTZ4 195 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 UNKLQ9H9P5 680 aaKnown RBP9.52□□□□□ -0.89
ZNF558-201ENST00000301475 DECR2Q9NUI1 292 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 AK3Q9UIJ7 227 aa9.52□□□□□ -0.89
ZNF558-201ENST00000301475 SERPINE3A8MV23 424 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 A8MWP6 167 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 C9J4A7 227 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TCAPO15273 167 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TSPAN2O60636 221 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DDAH2O95865 285 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DBHP09172 617 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 GIMD1P0DJR0 217 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 CSNK1A1P48729 337 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 EFNA3P52797 238 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 CD81P60033 236 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 KISS1Q15726 138 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 SP5Q6BEB4 398 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 FBXW12Q6X9E4 464 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DPPA2Q7Z7J5 298 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DTX1Q86Y01 620 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM171Q8WVE6 324 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TVP23CQ96ET8 276 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 BOD1Q96IK1 185 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 NUDT22Q9BRQ3 303 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 RPP25Q9BUL9 199 aaKnown RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 PLA2G2FQ9BZM2 168 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 VN1R1Q9GZP7 353 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 NAA60Q9H7X0 242 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 SIRT7Q9NRC8 400 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 WSB1Q9Y6I7 421 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 WDFY4Q6ZS81 3184 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 BLACEA4D250 179 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 EREGO14944 169 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 RRP8O43159 456 aaKnown RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 PGA5P0DJD9 388 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 TMEM225BP0DP42 221 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 KIR2DL1P43626 348 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 DAP3P51398 398 aaKnown RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 OGFOD3Q6PK18 319 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 ZNF721Q8TF20 911 aa9.51□□□□□ -0.89
ZNF558-201ENST00000301475 RTN4IP1Q8WWV3 396 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 LIN37Q96GY3 246 aaPredicted RBP9.51□□□□□ -0.89
ZNF558-201ENST00000301475 FAM210BQ96KR6 192 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms