RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 NUP50Q9UKX7 468 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 NOP16Q9Y3C1 178 aaKnown RBP13.68□□□□□ -0.22
NPM1-201ENST00000296930 TRAV1-2A0A0B4J238 106 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 TMEM89A2RUT3 159 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 RPS2P15880 293 aaKnown RBP13.68□□□□□ -0.22
NPM1-201ENST00000296930 MYL9P24844 172 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 CFPP27918 469 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 RBMS3Q6XE24 437 aaKnown RBP13.68□□□□□ -0.22
NPM1-201ENST00000296930 DOK3Q7L591 496 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 NR2C2APQ86WQ0 139 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 C22orf15Q8WYQ4 148 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 SNTG1Q9NSN8 517 aa13.68□□□□□ -0.22
NPM1-201ENST00000296930 TRAV8-7A0A075B6U6 113 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 IGHV3-64DA0A0J9YX35 117 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 SMIM30A4D0T7 59 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 ANKRD61A6NGH8 418 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 ZNF205O95201 554 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 CD2P06729 351 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 IRF2P14316 349 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 SRMP19623 302 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 PRSS12P56730 875 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 ZDHHC22Q8N966 263 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 SPSB4Q96A44 273 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 ADAT3Q96EY9 351 aaPredicted RBP13.67□□□□□ -0.22
NPM1-201ENST00000296930 REEP6Q96HR9 211 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 TMEM246Q9BRR3 403 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 BARHL1Q9BZE3 327 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 SLIRPQ9GZT3 109 aaKnown RBP13.67□□□□□ -0.22
NPM1-201ENST00000296930 SLC22A4Q9H015 551 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 ESM1Q9NQ30 184 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 CCDC59Q9P031 241 aaKnown RBP13.67□□□□□ -0.22
NPM1-201ENST00000296930 ZNF391Q9UJN7 358 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 V9GYS6 101 aa13.67□□□□□ -0.22
NPM1-201ENST00000296930 XRCC2O43543 280 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 DHRS3O75911 302 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 CD200P41217 278 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 GNB2P62879 340 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 ZNF92Q03936 586 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 PAX8Q06710 450 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 MAB21L1Q13394 359 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 ZNF404Q494X3 552 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 NLRC3Q7RTR2 1065 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 PARP16Q8N5Y8 322 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 OR11L1Q8NGX0 322 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 Q8TCH9 128 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 NEIL1Q96FI4 390 aaPredicted RBP13.66□□□□□ -0.22
NPM1-201ENST00000296930 RGCCQ9H4X1 137 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 PPIAL4AQ9Y536 164 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 FSTP19883 344 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 PMELP40967 661 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 CAV3P56539 151 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 OR8G1Q15617 311 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 TUSC1Q2TAM9 212 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 KLF17Q5JT82 389 aaPredicted RBP13.66□□□□□ -0.22
NPM1-201ENST00000296930 BTNL3Q6UXE8 466 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 TPRA1Q86W33 373 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 C3orf56Q8N813 242 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 OR8B3Q8NGG8 313 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 FGGYQ96C11 551 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 OR8B2Q96RD0 313 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 ZNF69Q9UC07 566 aa13.66□□□□□ -0.22
NPM1-201ENST00000296930 A0A0G2JK05 382 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 A6NIN4 97 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 CD300LBA8K4G0 201 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 PPIAL4GP0DN37 164 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 IGFBP3P17936 291 aaPredicted RBP13.65□□□□□ -0.22
NPM1-201ENST00000296930 ACKR3P25106 362 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 CD80P33681 288 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 OR10A3P58181 314 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 UBA52P62987 128 aaKnown RBP13.65□□□□□ -0.22
NPM1-201ENST00000296930 FAM3AP98173 230 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 PAX2Q02962 417 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 DGUOKQ16854 277 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 CEP78Q5JTW2 689 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 CCDC54Q8NEL0 328 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 GFI1Q99684 422 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 TCF7L1Q9HCS4 588 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 TAS2R4Q9NYW5 299 aa13.65□□□□□ -0.22
NPM1-201ENST00000296930 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 GGT3PA6NGU5 568 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 GMDSO60547 372 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 MTRF1O75570 445 aaKnown RBP13.64□□□□□ -0.23
NPM1-201ENST00000296930 RAB3BP20337 219 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 CA6P23280 308 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 OR8B8Q15620 311 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 FAM201AQ5SY85 155 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 DCDC5Q6ZRR9 648 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 SIGLECL1Q8N7X8 197 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 RAB40AQ8WXH6 277 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 FOXJ3Q9UPW0 622 aa13.64□□□□□ -0.23
NPM1-201ENST00000296930 DHRS7CA6NNS2 312 aa13.63□□□□□ -0.23
NPM1-201ENST00000296930 PITPNBP48739 271 aa13.63□□□□□ -0.23
NPM1-201ENST00000296930 RORCP51449 518 aa13.63□□□□□ -0.23
NPM1-201ENST00000296930 PRAMEF6Q5VXH4 476 aa13.63□□□□□ -0.23
NPM1-201ENST00000296930 ZNF529Q6P280 563 aa13.63□□□□□ -0.23
NPM1-201ENST00000296930 SERPINA12Q8IW75 414 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms