RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SVILO95425 2214 aa13.74□□□□□ -0.21
NCKIPSD-201ENST00000294129 PCNX2A6NKB5 2137 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 DBX1A6NMT0 343 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 FOXI3A8MTJ6 420 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 GP1BAP07359 652 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 FOXG1P55316 489 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 ABHD17BQ5VST6 288 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 ANAPC10Q9UM13 185 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 TEX13DA0A0J9YY54 714 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 A0A1W2PNU3 283 aaPredicted RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 MRPL33O75394 65 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 HLA-GP17693 338 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 SRSF4Q08170 494 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 FOXO1Q12778 655 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 MRPS24Q96EL2 167 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 ADGRG7Q96K78 797 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 TAAR9Q96RI9 348 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 CMSS1Q9BQ75 279 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 SULT4A1Q9BR01 284 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 RNF126Q9BV68 326 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 ASF1BQ9NVP2 202 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 RASL12Q9NYN1 266 aa13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 MAP1BP46821 2468 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-201ENST00000294129 IGKV1-12A0A0C4DH73 117 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 MSTNO14793 375 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 IGKV1D-12P01611 117 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 HLA-HP01893 362 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 MAGEA5P43359 124 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 RAB32Q13637 225 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 SNTB1Q13884 538 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 ZNF345Q14585 488 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 CNN3Q15417 329 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 SP6Q3SY56 376 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 HSD17B13Q7Z5P4 300 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 TMEM185AQ8NFB2 350 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 TM2D1Q9BX74 207 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 PRRG4Q9BZD6 226 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 OR51B6Q9H340 312 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 PTGER4P35408 488 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 DEFA5Q01523 94 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 LHFPL1Q86WI0 220 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 SULF2Q8IWU5 870 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 CPEB3Q8NE35 698 aaKnown RBP13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 FNDC9Q8TBE3 224 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 NTNG2Q96CW9 530 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 SCGB3A2Q96PL1 93 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
NCKIPSD-201ENST00000294129 OR6C6A6NF89 314 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 ALDH3B1P43353 468 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 FAM3AP98173 230 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 TUSC5Q8IXB3 177 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 TMED6Q8WW62 240 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 CPNE4Q96A23 557 aaPredicted RBP13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 SPSB1Q96BD6 273 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 NEURL1O76050 574 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 FARS2O95363 451 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 SCGB1D2O95969 90 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 CNR1P21554 472 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 DHRS13Q6UX07 377 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 OR2M7Q8NG81 312 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 SLC25A32Q9H2D1 315 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 LIME1Q9H400 295 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 GLS2Q9UI32 602 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 ST3GAL6Q9Y274 331 aa13.71□□□□□ -0.21
NCKIPSD-201ENST00000294129 DNPH1O43598 174 aa13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR5H8P0DN80 308 aa13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 EDN3P14138 238 aa13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 RBMXP38159 391 aaKnown RBP13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 GFRA1P56159 465 aa13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 ARF1P84077 181 aaKnown RBP13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 PLGLB1Q02325 96 aa13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 PEG10Q86TG7 708 aaKnown RBP13.71□□□□□ -0.22
NCKIPSD-201ENST00000294129 CFAP47Q6ZTR5 3102 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 HSPB6O14558 160 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 IL32P24001 234 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR1C1Q15619 314 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 PHLDA2Q53GA4 152 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 CALHM1Q8IU99 346 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR10AD1Q8NGE0 317 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 PAPOLGQ9BWT3 736 aaKnown RBP13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 NMES1Q9C002 83 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF629Q9UEG4 869 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 IL17BQ9UHF5 180 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 ANXA10Q9UJ72 324 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 SLC7A11Q9UPY5 501 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 CD79AP11912 226 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 SLC25A26Q70HW3 274 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 C5orf24Q7Z6I8 188 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 VASH2Q86V25 355 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR1S2Q8NGQ3 325 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 RAB18Q9NP72 206 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 R4GN57 208 aa13.7□□□□□ -0.22
NCKIPSD-201ENST00000294129 C5orf49A4QMS7 147 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms