RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 A6NHS1 94 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 SH2D7A6NKC9 451 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 M0R036 132 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 TUSC2O75896 110 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 GABARAPO95166 117 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ARSBP15848 533 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 PRSS3P35030 304 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 SSX1Q16384 188 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 RGS7BPQ6MZT1 257 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 DRAXINQ8NBI3 349 aaPredicted RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 OR2G2Q8NGZ5 317 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB2BQ8WUD1 216 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 RBM38Q9H0Z9 239 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM100Q9NV29 134 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 SDHAF2Q9NX18 166 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ONECUT1Q9UBC0 465 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 OR52A1Q9UKL2 312 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF281Q9Y2X9 895 aa7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 SF3B6Q9Y3B4 125 aaKnown RBP7.3□□□□□ -1.24
PTPDC1-201ENST00000288976 TRDV1A0A1B0GX56 115 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 KANTRA0A1W2PQU2 76 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 FUOMA2VDF0 154 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF503-AS2A6NEH8 195 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 M0R135 149 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 XRCC2O43543 280 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SC5DO75845 299 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CLDN14O95500 239 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 HLA-HP01893 362 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 LIPAP38571 399 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 PPP5CP53041 499 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB31Q13636 194 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CNPY1Q3B7I2 92 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ZBTB37Q5TC79 503 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 FGFBP3Q8TAT2 258 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CD300LFQ8TDQ1 290 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SPSB4Q96A44 273 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 PINX1Q96BK5 328 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF799Q96GE5 643 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 POM121L2Q96KW2 1035 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 GINS3Q9BRX5 216 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 PBOV1Q9GZY1 135 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 C14orf119Q9NWQ9 140 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 GHRLQ9UBU3 117 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CEPT1Q9Y6K0 416 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 TRBV5-5A0A0J9YX44 114 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 A0A1W2PPH5 198 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 A8MV72 311 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SIRPB1O00241 398 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CD3EP07766 207 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF728P0DKX0 622 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CCL2P13500 99 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 FGF9P31371 208 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 CCKARP32238 428 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 KIR3DL2P43630 455 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 NAAAQ02083 359 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 TFF3Q07654 80 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM108Q6UXF1 575 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 OR6F1Q8NGZ6 308 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ACOT12Q8WYK0 555 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 DPAGT1Q9H3H5 408 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SLC22A13Q9Y226 551 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ALG5Q9Y673 324 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 OR4C45A6NMZ5 311 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM127O75204 238 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 NXPH3O95157 252 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 LALBAP00709 142 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 IFNA10P01566 189 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 HOXB5P09067 269 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 OR8U9P0C7N5 309 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 MFGE8Q08431 387 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 DOC2BQ14184 412 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 MRPL41Q8IXM3 137 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SLC30A7Q8NEW0 376 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 AKAP1Q92667 903 aaKnown RBP eCLIP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 DPF1Q92782 380 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 FGGYQ96C11 551 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 PIK3IP1Q96FE7 263 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 OMGP23515 440 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 KIR2DL3P43628 341 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 VEGFCP49767 419 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 EIF5AP63241 154 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 DBPQ10586 325 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 ACSM3Q53FZ2 586 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 WDR38Q5JTN6 314 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 EIF5AL1Q6IS14 154 aaKnown RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 SPNS3Q6ZMD2 512 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 PLPP7Q8NBV4 271 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 OR51H1Q8NH63 302 aa7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 APOBEC3DQ96AK3 386 aaPredicted RBP7.29□□□□□ -1.24
PTPDC1-201ENST00000288976 RAF1P04049 648 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF182P17025 639 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF121P58317 390 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 NANOS3P60323 173 aaKnown RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 RSPO1Q2MKA7 263 aaPredicted RBP7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 UNQ9370/PRO34162Q6UXP9 181 aa7.28□□□□□ -1.24
PTPDC1-201ENST00000288976 GLCCI1Q86VQ1 547 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms