RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SIRT7Q9NRC8 400 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 CA10Q9NS85 328 aa14.69□□□□□ -0.06
SH3RF1-201ENST00000284637 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 FIGNL2A6NMB9 653 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 FAHD2BQ6P2I3 314 aaPredicted RBP14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 FAHD2AQ96GK7 314 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 SPTY2D1-AS1A0A0U1RR47 76 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 MPZL1O95297 269 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 TMEM267Q0VDI3 215 aaPredicted RBP14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 PWWP2BQ6NUJ5 590 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 OR11H4Q8NGC9 324 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 OR5C1Q8NGR4 320 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 NTNG2Q96CW9 530 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 MRPS24Q96EL2 167 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 COMMD5Q9GZQ3 224 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 CCL27Q9Y4X3 112 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 GALR1P47211 349 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 LSM11P83369 360 aaKnown RBP eCLIP14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 CNTD2Q9H8S5 307 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 SLC25A30Q5SVS4 291 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 MRGPREQ86SM8 312 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 SPACA9Q96E40 222 aaPredicted RBP14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 OR2A5Q96R48 311 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 TBX21Q9UL17 535 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 NRAPQ86VF7 1730 aa14.68□□□□□ -0.06
SH3RF1-201ENST00000284637 SERTM2A0A1B0GWG4 89 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 FAM24AA6NFZ4 105 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 TCF21O43680 179 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 CTLA4P16410 223 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 OR3A4PP47883 348 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 LDLRAD3Q86YD5 345 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 S1PR3Q99500 378 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 ESRP2Q9H6T0 727 aaKnown RBP14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 PRR13Q9NZ81 148 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 MBD1Q9UIS9 605 aaPredicted RBP14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 A0A1B0GV90 55 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 CD160O95971 181 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 CT62P0C5K7 136 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 GLB1P16278 677 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 ZBTB25P24278 435 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 SUMO3P55854 103 aaPredicted RBP14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 Q7L0L9 218 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 FOXB1Q99853 325 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 ADAM20O43506 726 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 PRDX4Q13162 271 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 OR1F12Q8NHA8 337 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 MRGPRX3Q96LB0 322 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 FKBP11Q9NYL4 201 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 MRM2Q9UI43 246 aaKnown RBP14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 B4DEV8 164 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 GPR37O15354 613 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 HSBP1O75506 76 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 RPL11P62913 178 aaKnown RBP14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 VN1R4Q7Z5H5 301 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 OR10G3Q8NGC4 313 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 IL22RA2Q969J5 263 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 LRRC61Q9BV99 259 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 GSN-AS1Q9NRJ2 163 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 TREM2Q9NZC2 230 aa14.67□□□□□ -0.06
SH3RF1-201ENST00000284637 RBFOX3A6NFN3 312 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TMEM241Q24JQ0 296 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 PABPC1L2AQ5JQF8 200 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 KCNE4Q8WWG9 221 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TAAR9Q96RI9 348 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 AMDHD2Q9Y303 409 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 BTAF1O14981 1849 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 IGHA1P01876 353 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 Q5BKY6 102 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 MOB1BQ7L9L4 216 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 OR10X1Q8NGY0 326 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 SPSB1Q96BD6 273 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 PIK3IP1Q96FE7 263 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TNFSF18Q9UNG2 199 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TMED3Q9Y3Q3 217 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 AHDC1Q5TGY3 1603 aaPredicted RBP14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TRAV34A0A0B4J273 112 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 MEX3AA1L020 520 aaKnown RBP14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 CBR3O75828 277 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 ERVFC1-1P60608 527 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 DTD1Q8TEA8 209 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 GALMQ96C23 342 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TOGARAM1Q9Y4F4 1720 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 SIGLEC5O15389 551 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 HPP00738 406 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 ZXDAP98168 799 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 SIGLEC14Q08ET2 396 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 RTL8BQ17RB0 113 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 LHX8Q68G74 356 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 RHOVQ96L33 236 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 GNB4Q9HAV0 340 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 PARP11Q9NR21 331 aa14.66□□□□□ -0.06
SH3RF1-201ENST00000284637 TRPM3Q9HCF6 1732 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 A0A1W2PNV4 684 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 NHLH2Q02577 135 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 OR10A7Q8NGE5 316 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 CHST6Q9GZX3 395 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 ITGBL1O95965 494 aaPredicted RBP14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 PMCHP20382 165 aa14.65□□□□□ -0.06
SH3RF1-201ENST00000284637 TRIB1Q96RU8 372 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms