RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 NTNG2Q96CW9 530 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 SLC5A7Q9GZV3 580 aa11.28□□□□□ -0.6
C9orf3-201ENST00000277198 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-201ENST00000277198 NDUFA2O43678 99 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 ADAP1O75689 374 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 OPN1LWP04000 364 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 HPNP05981 417 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 FAM87AP0C7U9 286 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-201ENST00000277198 SCRN3Q0VDG4 424 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 UBE2V2Q15819 145 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 PAQR8Q8TEZ7 354 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 SPTSSAQ969W0 71 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 SPSB1Q96BD6 273 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 ANGPTL4Q9BY76 406 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 DHHO43323 396 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 DNPH1O43598 174 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 SNAPINO95295 136 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 IFNA2P01563 188 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 CTSDP07339 412 aaPredicted RBP11.27□□□□□ -0.61
C9orf3-201ENST00000277198 GLRA1P23415 457 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 RBMXP38159 391 aaKnown RBP11.27□□□□□ -0.61
C9orf3-201ENST00000277198 EXT1Q16394 746 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 TBR1Q16650 682 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 FAM74A3Q4VXF1 159 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 C1QL2Q7Z5L3 287 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
C9orf3-201ENST00000277198 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 OR10Z1Q8NGY1 313 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 NABP1Q96AH0 204 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 OR10C1Q96KK4 312 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 OR5AC2Q9NZP5 309 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 HSF4Q9ULV5 492 aa11.27□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF462Q96JM2 2506 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 NPIPA2E9PIF3 369 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 E9PLN8 166 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 F5H5K5 113 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 NPIPA3F8WFD2 350 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 H7C2Y5 167 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 M0R135 149 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 ACTL6AO96019 429 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 PLATP00750 562 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 GAPDHP04406 335 aaKnown RBP11.26□□□□□ -0.61
C9orf3-201ENST00000277198 FCGR2AP12318 317 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 RAB32Q13637 225 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 PCOLCEQ15113 449 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 FAM27BQ5VT28 67 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF799Q96GE5 643 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 SF3B5Q9BWJ5 86 aaKnown RBP11.26□□□□□ -0.61
C9orf3-201ENST00000277198 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
C9orf3-201ENST00000277198 PADI1Q9ULC6 663 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 SPTA1P02549 2419 aa11.26□□□□□ -0.61
C9orf3-201ENST00000277198 MSGN1A6NI15 193 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 GJE1A6NN92 205 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF705EA8MWA4 302 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-201ENST00000277198 TCN2P20062 427 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 SERPINA2P20848 420 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 ANOS1P23352 680 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 BLOC1S1P78537 153 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 MRPS34P82930 218 aaKnown RBP11.25□□□□□ -0.61
C9orf3-201ENST00000277198 RSPO1Q2MKA7 263 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-201ENST00000277198 SULF2Q8IWU5 870 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 OR9K2Q8NGE7 335 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 MR1Q95460 341 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 Q96M66 194 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF391Q9UJN7 358 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 PIGLQ9Y2B2 252 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 F8W036 122 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-201ENST00000277198 KCNAB3O43448 404 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 JTBO76095 146 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 HTR3BO95264 441 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 CST4P01036 141 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 IFNA21P01568 189 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 CD63P08962 238 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 ADCYAP1P18509 176 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 PI3P19957 117 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 DTYMKP23919 212 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 CAV2P51636 162 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 PLXDC2Q6UX71 529 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 M1APQ8TC57 530 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 IMMP1LQ96LU5 166 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF700Q9H0M5 742 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 PLEKHJ1Q9NW61 149 aa11.25□□□□□ -0.61
C9orf3-201ENST00000277198 IGHV1-45A0A0A0MS14 117 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 ZNF891A8MT65 544 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-201ENST00000277198 GPR31O00270 319 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 SERPINA5P05154 406 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 HEXAP06865 529 aa11.24□□□□□ -0.61
C9orf3-201ENST00000277198 FAHP16930 419 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms