RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 KLHDC2Q9Y2U9 406 aa8.11□□□□□ -1.11
PDGFC-201ENST00000274071 A0A0A6YYH2 397 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 A6NJ64 397 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SERPINE3A8MV23 424 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 HYPMO75409 117 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CCL5P13501 91 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CTRLP40313 264 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SCGB2A2Q13296 93 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 FHL1Q13642 323 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ERASQ7Z444 233 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CALHM1Q8IU99 346 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 OR10G4Q8NGN3 311 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ZPLD1Q8TCW7 415 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 PTX4Q96A99 478 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 WDR34Q96EX3 536 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 OR7D2Q96RA2 312 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CMKLR1Q99788 373 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 VN1R3Q9BXE9 311 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 AK3Q9UIJ7 227 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TUBD1Q9UJT1 453 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 MDC1Q14676 2089 aaKnown RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 IGLV3-16A0A075B6K0 115 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TRAV34A0A0B4J273 112 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 OR5B21A6NL26 309 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 C4orf47A7E2U8 309 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CEACAM18A8MTB9 384 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 MPZL1O95297 269 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 GJB5O95377 273 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ABHD16AO95870 558 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SCGB1D2O95969 90 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ATP1B2P14415 290 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF43P17038 809 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 EPHA8P29322 1005 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 GCH1P30793 250 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 NCBP2P52298 156 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TBPL1P62380 186 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 BTN3A2P78410 334 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CDK3Q00526 305 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 MLC1Q15049 377 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 C1orf122Q6ZSJ8 110 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 C16orf82Q7Z2V1 217 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 FAM220AQ7Z4H9 259 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CXorf40AQ8TE69 158 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF480Q8WV37 535 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TSEN15Q8WW01 171 aaKnown RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 BET1LQ9NYM9 111 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 LRP12Q9Y561 859 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 IER3IP1Q9Y5U9 82 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF840PA6NDX5 716 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 TMPRSS11DO60235 418 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 LYPD3O95274 346 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 EFEMP2O95967 443 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CT45A8P0DMV1 189 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CT45A9P0DMV2 189 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 IGLC3P0DOY3 106 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SLC6A6P31641 620 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 BSGP35613 385 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ASCL1P50553 236 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 UBE2NP61088 152 aaKnown RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CT45A2Q5DJT8 189 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SLC16A9Q7RTY1 509 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ADGRE4PQ86SQ3 457 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SELENOHQ8IZQ5 122 aaKnown RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 LILRA3Q8N6C8 439 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-201ENST00000274071 CHST4Q8NCG5 386 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 OR4S2Q8NH73 311 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF596Q8TC21 504 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 FAM3CQ92520 227 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 SMPXQ9UHP9 88 aa8.1□□□□□ -1.11
PDGFC-201ENST00000274071 A0A1W2PRS3 328 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 C9orf172C9J069 976 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 E5RGE8 158 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 SAP30O75446 220 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 STAG3L3P0CL85 134 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 PSMB5P28074 263 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 RBPJQ06330 500 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 KRTCAP3Q53RY4 240 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 TMCO2Q7Z6W1 182 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM123Q8N131 208 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-201ENST00000274071 NICN1Q9BSH3 213 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF443Q9Y2A4 671 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-201ENST00000274071 NSG2Q9Y328 171 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 MED31Q9Y3C7 131 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 CACNA1CQ13936 2221 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 CENPVL1A0A0U1RR11 272 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM212A6NML5 194 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 RNF212BA8MTL3 300 aa8.09□□□□□ -1.11
PDGFC-201ENST00000274071 HMGA1P17096 107 aaKnown RBP8.09□□□□□ -1.11
PDGFC-201ENST00000274071 ATP6V0CP27449 155 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms