RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C2CD4DB7Z1M9 353 aa24■■□□□ 1.43
CBX4-201ENST00000269397 ALDH3B1P43353 468 aa24■■□□□ 1.43
CBX4-201ENST00000269397 NOVA1P51513 510 aaKnown RBP24■■□□□ 1.43
CBX4-201ENST00000269397 RSPO1Q2MKA7 263 aaPredicted RBP24■■□□□ 1.43
CBX4-201ENST00000269397 OR5L1Q8NGL2 311 aa24■■□□□ 1.43
CBX4-201ENST00000269397 PLEKHA2Q9HB19 425 aa24■■□□□ 1.43
CBX4-201ENST00000269397 C19orf12Q9NSK7 152 aa24■■□□□ 1.43
CBX4-201ENST00000269397 ZDHHC8Q9ULC8 765 aa24■■□□□ 1.43
CBX4-201ENST00000269397 B3GALT1Q9Y5Z6 326 aa24■■□□□ 1.43
CBX4-201ENST00000269397 E5RGE8 158 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 SULT1A1P50225 295 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 HMGN3Q15651 99 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 HIST3H3Q16695 136 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 SLC16A14Q7RTX9 510 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 RTN4IP1Q8WWV3 396 aaPredicted RBP23.99■■□□□ 1.43
CBX4-201ENST00000269397 CHST5Q9GZS9 411 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 LUZP4Q9P127 313 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 AK3Q9UIJ7 227 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 RCL1Q9Y2P8 373 aaKnown RBP23.99■■□□□ 1.43
CBX4-201ENST00000269397 NSG2Q9Y328 171 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 ABCA11PQ4W5N1 156 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 IGSF11Q5DX21 431 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 MARS2Q96GW9 593 aaKnown RBP23.99■■□□□ 1.43
CBX4-201ENST00000269397 MIOXQ9UGB7 285 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 SDK2Q58EX2 2172 aa23.99■■□□□ 1.43
CBX4-201ENST00000269397 ETV2O00321 342 aaPredicted RBP23.98■■□□□ 1.43
CBX4-201ENST00000269397 OR8U8P0C7N1 319 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 PPP1CCP36873 323 aaKnown RBP23.98■■□□□ 1.43
CBX4-201ENST00000269397 LTBRP36941 435 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 GUCA1AP43080 201 aaPredicted RBP23.98■■□□□ 1.43
CBX4-201ENST00000269397 OR2AE1Q8NHA4 323 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 GNRHR2Q96P88 292 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 FAM230AA0A1W2PPH8 454 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 MTCP1P56278 107 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 SNAI3Q3KNW1 292 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 Q96M66 194 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 SEBOXQ9HB31 216 aaPredicted RBP23.98■■□□□ 1.43
CBX4-201ENST00000269397 KCNIP3Q9Y2W7 256 aa23.98■■□□□ 1.43
CBX4-201ENST00000269397 ZNF728P0DKX0 622 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 TMEM187Q14656 261 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 KCNMB1Q16558 191 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 OR11L1Q8NGX0 322 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 V9GYS6 101 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 TRBV23-1A0A0A0MS06 115 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 BORCS7-ASMTA0A0B4J1R7 106 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 CLN5O75503 358 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 IGLV3-1P01715 115 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 PNLIPP16233 465 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 ITGA3P26006 1051 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 SLC25A53Q5H9E4 307 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 TMEM182Q6ZP80 229 aaPredicted RBP23.97■■□□□ 1.43
CBX4-201ENST00000269397 RBM24Q9BX46 236 aaKnown RBP23.97■■□□□ 1.43
CBX4-201ENST00000269397 ARV1Q9H2C2 271 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 SEC11BP0C7V7 166 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 POLR2GP62487 172 aaKnown RBP eCLIP23.97■■□□□ 1.43
CBX4-201ENST00000269397 SLC35A1P78382 337 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 PDCD1Q15116 288 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 NCMAPQ5T1S8 102 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 OR2M3Q8NG83 312 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 RARRES2Q99969 163 aa23.97■■□□□ 1.43
CBX4-201ENST00000269397 WDR77Q9BQA1 342 aaPredicted RBP23.97■■□□□ 1.43
CBX4-201ENST00000269397 METTL1Q9UBP6 276 aaKnown RBP23.97■■□□□ 1.43
CBX4-201ENST00000269397 RRP8O43159 456 aaKnown RBP23.96■■□□□ 1.43
CBX4-201ENST00000269397 MSR1P21757 451 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 ENDOGQ14249 297 aaKnown RBP23.96■■□□□ 1.43
CBX4-201ENST00000269397 FAM213BQ8TBF2 198 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 NAA60Q9H7X0 242 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 KCNJ16Q9NPI9 418 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 PUS1Q9Y606 427 aaKnown RBP eCLIP23.96■■□□□ 1.43
CBX4-201ENST00000269397 PIAS2O75928 621 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 P2RY1P47900 373 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 NKAIN1Q4KMZ8 207 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 PP6455Q8WZ26 134 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 ZNF385AQ96PM9 386 aaKnown RBP23.96■■□□□ 1.43
CBX4-201ENST00000269397 TAAR9Q96RI9 348 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 MYOTQ9UBF9 498 aa23.96■■□□□ 1.43
CBX4-201ENST00000269397 AQP7P3A6NL99 342 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 EIF1BO60739 113 aaKnown RBP23.95■■□□□ 1.42
CBX4-201ENST00000269397 EIF1P41567 113 aaKnown RBP23.95■■□□□ 1.42
CBX4-201ENST00000269397 CSNK1A1P48729 337 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 ZNF565Q8N9K5 539 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 GJC3Q8NFK1 279 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 PLEK2Q9NYT0 353 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 GPR37O15354 613 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 MSX1P28360 303 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 ECI1P42126 302 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 WDSUB1Q8N9V3 476 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 ADPRHL1Q8NDY3 354 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 AKR7LQ8NHP1 331 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 GINS3Q9BRX5 216 aa23.95■■□□□ 1.42
CBX4-201ENST00000269397 CCDC187A0A096LP49 1063 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 M0R135 149 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 IGHV2-5P01817 119 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 RD3LP0DJH9 198 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 RSU1Q15404 277 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 ZNF239Q16600 458 aaKnown RBP23.94■■□□□ 1.42
CBX4-201ENST00000269397 FBXW12Q6X9E4 464 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 SYT13Q7L8C5 426 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 SLC22A8Q8TCC7 542 aa23.94■■□□□ 1.42
CBX4-201ENST00000269397 HPSE2Q8WWQ2 592 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms