RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 C14orf79Q96F83 325 aa19.3■□□□□ 0.68
CDR2-201ENST00000268383 A0A0U1RQV5 110 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 ZNF616Q08AN1 781 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 OR5L1Q8NGL2 311 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 ISOC2Q96AB3 205 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 CTSSP25774 331 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 NTF4P34130 210 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 ZNF84P51523 738 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 RSU1Q15404 277 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 FAM189A2Q15884 450 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 ZNF774Q6NX45 483 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 SH3BGRL3Q9H299 93 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 BIN3Q9NQY0 253 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 ZNF407Q9C0G0 2248 aa19.29■□□□□ 0.68
CDR2-201ENST00000268383 GEMIN2O14893 280 aaKnown RBP19.28■□□□□ 0.68
CDR2-201ENST00000268383 SMCO1Q147U7 214 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 OR9K2Q8NGE7 335 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 SLC25A43Q8WUT9 341 aaPredicted RBP19.28■□□□□ 0.68
CDR2-201ENST00000268383 PP6455Q8WZ26 134 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 ULBP2Q9BZM5 246 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 GHRLQ9UBU3 117 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 CTSDP07339 412 aaPredicted RBP19.28■□□□□ 0.68
CDR2-201ENST00000268383 SNRPEP62304 92 aaKnown RBP19.28■□□□□ 0.68
CDR2-201ENST00000268383 SWI5Q1ZZU3 235 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 MIDNQ504T8 468 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 ZIC4Q8N9L1 334 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 OR52M1Q8NGK5 317 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 AKR7LQ8NHP1 331 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 RPS10P5Q9NQ39 176 aa19.28■□□□□ 0.68
CDR2-201ENST00000268383 FAM186AA6NE01 2351 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 TAAR5O14804 337 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 IFNA21P01568 189 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 CTAG1AP78358 180 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 EIF5AL1Q6IS14 154 aaKnown RBP19.27■□□□□ 0.68
CDR2-201ENST00000268383 PPP1R3BQ86XI6 285 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 TMEM123Q8N131 208 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 TMEM54Q969K7 222 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 IP6K3Q96PC2 410 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 USB1Q9BQ65 265 aaKnown RBP19.27■□□□□ 0.68
CDR2-201ENST00000268383 SRXN1Q9BYN0 137 aa19.27■□□□□ 0.68
CDR2-201ENST00000268383 SNRNP70P08621 437 aaKnown RBP19.27■□□□□ 0.67
CDR2-201ENST00000268383 EIF1P41567 113 aaKnown RBP19.27■□□□□ 0.67
CDR2-201ENST00000268383 SURF2Q15527 256 aaPredicted RBP19.27■□□□□ 0.67
CDR2-201ENST00000268383 NAA11Q9BSU3 229 aaPredicted RBP19.27■□□□□ 0.67
CDR2-201ENST00000268383 CACFD1Q9UGQ2 172 aa19.27■□□□□ 0.67
CDR2-201ENST00000268383 LY6G6EA0A0G2JKS1 128 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 A0A0J9YW62 118 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 ZIC3O60481 467 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 RTN4IP1Q8WWV3 396 aaPredicted RBP19.26■□□□□ 0.67
CDR2-201ENST00000268383 PROK2Q9HC23 129 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 TUBD1Q9UJT1 453 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 ZDHHC8Q9ULC8 765 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 U3KQA8 63 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 FREM1Q5H8C1 2179 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 IGKV1-12A0A0C4DH73 117 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 LINC01387J3KSC0 135 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 IGKV1D-12P01611 117 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 NHLH2Q02577 135 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 HABP2Q14520 560 aaPredicted RBP19.26■□□□□ 0.67
CDR2-201ENST00000268383 PCOLCEQ15113 449 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 C10orf128Q5T292 105 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 TMEM156Q8N614 296 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 SFT2D1Q8WV19 159 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 DNASE2BQ8WZ79 361 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 PHF7Q9BWX1 381 aaPredicted RBP19.26■□□□□ 0.67
CDR2-201ENST00000268383 CHRDQ9H2X0 955 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 PARP11Q9NR21 331 aa19.26■□□□□ 0.67
CDR2-201ENST00000268383 CCDC187A0A096LP49 1063 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 JTBO76095 146 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 ZNF728P0DKX0 622 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 OTX1P32242 354 aaPredicted RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 EIF5AP63241 154 aaKnown RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 SLC22A25Q6T423 547 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 HSD17B11Q8NBQ5 300 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 ALKBH3Q96Q83 286 aaPredicted RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 GPHA2Q96T91 129 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 URB1O60287 2271 aaKnown RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 TP53I11O14683 189 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 LCATP04180 440 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 DVL1P1P54792 670 aaPredicted RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 ABCA11PQ4W5N1 156 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 ZNF468Q5VIY5 522 aaPredicted RBP19.25■□□□□ 0.67
CDR2-201ENST00000268383 METTL9Q9H1A3 318 aa19.25■□□□□ 0.67
CDR2-201ENST00000268383 TSPAN15O95858 294 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 B4GALT1P15291 398 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 TMEM187Q14656 261 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 ZNF239Q16600 458 aaKnown RBP19.24■□□□□ 0.67
CDR2-201ENST00000268383 Q6ZPA2 131 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 RCL1Q9Y2P8 373 aaKnown RBP19.24■□□□□ 0.67
CDR2-201ENST00000268383 DOCK7Q96N67 2140 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 LOC102725191A0A1B0GVB3 256 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 EIF3GO75821 320 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDR2-201ENST00000268383 GLAP06280 429 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 RBMS3Q6XE24 437 aaKnown RBP19.24■□□□□ 0.67
CDR2-201ENST00000268383 OR10AD1Q8NGE0 317 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 CRLF2Q9HC73 371 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 HEXAP06865 529 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 PLXDC2Q6UX71 529 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 FBXL14Q8N1E6 418 aa19.24■□□□□ 0.67
CDR2-201ENST00000268383 FGFBP3Q8TAT2 258 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms