RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ZNF90Q03938 601 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 FUT7Q11130 342 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 MICBQ29980 383 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 MOGAT2Q3SYC2 334 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 CDC20BQ86Y33 519 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 ZNF808Q8N4W9 903 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 SEC14L6B5MCN3 397 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 C5orf67F2Z3F1 127 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 DVL1O14640 695 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 POU2F2P09086 479 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 FGF8P55075 233 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 POLR2GP62487 172 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
VPS33A-201ENST00000267199 SARGQ9BW04 601 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 GNG12Q9UBI6 72 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 PILRAQ9UKJ1 303 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
VPS33A-201ENST00000267199 IGHV1OR21-1A0A087WYE8 117 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 FKBP2P26885 142 aaKnown RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 ARL3P36405 182 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 TGIF1Q15583 401 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 TOMM20LQ6UXN7 152 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 OR5AS1Q8N127 324 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 FAM58AQ8N1B3 248 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 MRPL24Q96A35 216 aaKnown RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 UCK1Q9HA47 277 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 G3V3Q6 166 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 DHHO43323 396 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 FOXS1O43638 330 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 CDC14BO60729 498 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 PAX6P26367 422 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 MPGP29372 298 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 PTGER4P35408 488 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 ID4P47928 161 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 RRADP55042 308 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 SUMO3P55854 103 aaPredicted RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 PMS2P11Q13670 270 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 ZNF345Q14585 488 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 HLA-CQ95604 372 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 TM4SF19Q96DZ7 209 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 OR5AC2Q9NZP5 309 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 KCNMB2Q9Y691 235 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 PLPP3O14495 311 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 BMP5P22003 454 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 CALCRP30988 508 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 SNCAP37840 140 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 SELENOVP59797 346 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 SHBQ15464 509 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 ISXQ2M1V0 245 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 C2orf68Q2NKX9 166 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 ZNF574Q6ZN55 896 aaPredicted RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 OR2C3Q8N628 320 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 MRPS18BQ9Y676 258 aaKnown RBP10.25□□□□□ -0.77
VPS33A-201ENST00000267199 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
VPS33A-201ENST00000267199 A0A1W2PNV4 684 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 XKRY2A2RUG3 117 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 CD200P41217 278 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 KRTDAPP60985 99 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 SKP2Q13309 424 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 EXT1Q16394 746 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 TRIM61Q5EBN2 209 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 PLAC9Q5JTB6 97 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 DCAF12Q5T6F0 453 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 LINC00696Q6ZRV3 163 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 OR10G3Q8NGC4 313 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 OR2AE1Q8NHA4 323 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 THOC3Q96J01 351 aaKnown RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 BTF3L4Q96K17 158 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 NMES1Q9C002 83 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 ZDHHC11Q9H8X9 412 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 PSENENQ9NZ42 101 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 RBFOX3A6NFN3 312 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 MFNGO00587 321 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 GEMIN2O14893 280 aaKnown RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 NXPH2O95156 264 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 METTL15P1P0C7V9 234 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 TMEM267Q0VDI3 215 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 KMT5CQ86Y97 462 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 NOXO1Q8NFA2 376 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 SPACA9Q96E40 222 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 AMELYQ99218 206 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 CNOT1A5YKK6 2376 aaKnown RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 A0A1W2PR80 420 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 CXCL13O43927 109 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 ACTL6BO94805 426 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 TBX6O95947 436 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 TGFBR3Q03167 851 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 MGAT2Q10469 447 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 APOBEC4Q8WW27 367 aaKnown RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 RHOVQ96L33 236 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 ALX4Q9H161 411 aaPredicted RBP10.24□□□□□ -0.77
VPS33A-201ENST00000267199 HDGFL3Q9Y3E1 203 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 CBY1Q9Y3M2 126 aa10.24□□□□□ -0.77
VPS33A-201ENST00000267199 ASXL3Q9C0F0 2248 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms