RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ALX3O95076 343 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 CD79AP11912 226 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 HTR2CP28335 458 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 MNDAP41218 407 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 POU3F4P49335 361 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 RAB1AP62820 205 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 GLYATL3Q5SZD4 288 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 JAGN1Q8N5M9 183 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 OR51D1Q8NGF3 324 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 OR13C9Q8NGT0 318 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 PP6455Q8WZ26 134 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 REEP6Q96HR9 211 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 JMJD8Q96S16 334 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 C1QTNF6Q9BXI9 259 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 TBC1D24Q9ULP9 559 aa11.29□□□□□ -0.6
SGCA-201ENST00000262018 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 CENPXA8MT69 81 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 LDLRAD4O15165 306 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 XRCC2O43543 280 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 LILRA1O75019 489 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 PLP2Q04941 152 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 SWI5Q1ZZU3 235 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 MST1LQ2TV78 715 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 GDPD3Q7L5L3 318 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 CADM3Q8N126 398 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 DUSP18Q8NEJ0 188 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 OR52N4Q8NGI2 321 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 ENKURQ8TC29 256 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
SGCA-201ENST00000262018 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 ZNF75AQ96N20 296 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 ABHD1Q96SE0 405 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 CHST5Q9GZS9 411 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
SGCA-201ENST00000262018 RBFOX1Q9NWB1 397 aaKnown RBP11.28□□□□□ -0.6
SGCA-201ENST00000262018 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.6
SGCA-201ENST00000262018 STOMP27105 288 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 MAP2K3P46734 347 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 MMP15P51511 669 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 AP3S2P59780 193 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 SNRPD2P62316 118 aaKnown RBP11.27□□□□□ -0.6
SGCA-201ENST00000262018 PLA2G7Q13093 441 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 GSG1Q2KHT4 349 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 PLET1Q6UQ28 207 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 GLCCI1Q86VQ1 547 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 OR4D6Q8NGJ1 314 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 OR2AE1Q8NHA4 323 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 ITFG2Q969R8 447 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 PTX4Q96A99 478 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 PIGLQ9Y2B2 252 aa11.27□□□□□ -0.6
SGCA-201ENST00000262018 IGKV1-9A0A0C4DH69 117 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 BPNT1O95861 308 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ARSBP15848 533 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 FAHP16930 419 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 EPHA1P21709 976 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ACKR3P25106 362 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 FAM3AP98173 230 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 RIPPLY1Q0D2K3 151 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 FOXL1Q12952 345 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 MDP1Q86V88 176 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 TRIM63Q969Q1 353 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 RFT1Q96AA3 541 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 NKX3-1Q99801 234 aaPredicted RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 HEATR1Q9H583 2144 aaKnown RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 PLA2G10O15496 165 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ECDO95905 644 aaPredicted RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 IGKV3-15P01624 115 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 SERPINA5P05154 406 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 CBR1P16152 277 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 RAB6AP20340 208 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 CDK2P24941 298 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 GIFP27352 417 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 APLNRP35414 380 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ZNF93P35789 620 aaPredicted RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 GSK3AP49840 483 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 EFNB2P52799 333 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 RAB25P57735 213 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ZNF92Q03936 586 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 OR8B8Q15620 311 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 UBE2V2Q15819 145 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 ZBTB37Q5TC79 503 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 TMEM42Q69YG0 159 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 IZUMO1Q8IYV9 350 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
SGCA-201ENST00000262018 CREB3L1Q96BA8 519 aa11.26□□□□□ -0.61
SGCA-201ENST00000262018 KCNK15Q9H427 330 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms