RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SAXO1Q8IYX7 474 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 OR51D1Q8NGF3 324 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 OR10K1Q8NGX5 313 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF671Q8TAW3 534 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 RDH5Q92781 318 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 NRIP2Q9BQI9 281 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 DCUN1D5Q9BTE7 237 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 KCNK15Q9H427 330 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 RNF7Q9UBF6 113 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 ING4Q9UNL4 249 aa13.31□□□□□ -0.28
CCDC90B-201ENST00000260054 TANC2Q9HCD6 1990 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 WNT9BO14905 357 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 NOS1APO75052 506 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 KDM4BO94953 1096 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 CYB5AP00167 134 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 LHBP01229 141 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 SFTPBP07988 381 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 BCL3P20749 454 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 RORCP51449 518 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 ATP5J2P56134 94 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 GMFBP60983 142 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 ERVK11-1P61568 191 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 MRPS11P82912 194 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 HFEQ30201 348 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 FAM201AQ5SY85 155 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 IDNKQ5T6J7 187 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 POC1AQ8NBT0 407 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 OR11L1Q8NGX0 322 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 TBC1D15Q8TC07 691 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 FAM3DQ96BQ1 224 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 PERPQ96FX8 193 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 CEP19Q96LK0 163 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 GSX2Q9BZM3 304 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 WDR13Q9H1Z4 485 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 ELL3Q9HB65 397 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 ARID1AO14497 2285 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 NAV2Q8IVL1 2488 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 ITPR2Q14571 2701 aa13.3□□□□□ -0.28
CCDC90B-201ENST00000260054 A0A1W2PP11 408 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 SRRM5B3KS81 715 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 TRAPPC2LH3BP13 241 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 TMEM178BH3BS89 294 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 PAHP00439 452 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 ACAA1P09110 424 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 CALCBP10092 127 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 DNASE1P24855 282 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 SLC22A6Q4U2R8 563 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF554Q86TJ5 538 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 HPS1Q92902 700 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 SEH1LQ96EE3 360 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 S100A13Q99584 98 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 METTL9Q9H1A3 318 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 DLL4Q9NR61 685 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 EDARQ9UNE0 448 aa13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 ASH1LQ9NR48 2969 aaKnown RBP13.29□□□□□ -0.28
CCDC90B-201ENST00000260054 LRRC30A6NM36 301 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 SSX4O60224 188 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF205O95201 554 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 VSIG8P0DPA2 414 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 IRF2P14316 349 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 SNRPBP14678 240 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 ARSBP15848 533 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 RSU1Q15404 277 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 DGUOKQ16854 277 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 C2orf76Q3KRA6 126 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 OR10K2Q6IF99 312 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 BOLLQ8N9W6 283 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 TMEM104Q8NE00 496 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 C19orf18Q8NEA5 215 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 HES4Q9HCC6 221 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 IL36GQ9NZH8 169 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 CCDC59Q9P031 241 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 GHRLQ9UBU3 117 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 OR5V1Q9UGF6 321 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 ANKRD17O75179 2603 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 IFNL4K9M1U5 179 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 HTR3BO95264 441 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 BPNT1O95861 308 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 UBBP0CG47 229 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 SERPINA2P20848 420 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 GLRA1P23415 457 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 CD80P33681 288 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 QRFPP83859 136 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 PLA2G7Q13093 441 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 DEFB113Q30KQ7 82 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 Q8NFD4 153 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 NINJ1Q92982 152 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 SLIRPQ9GZT3 109 aaKnown RBP13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 IL36RNQ9UBH0 155 aa13.28□□□□□ -0.28
CCDC90B-201ENST00000260054 LDLRAD4O15165 306 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 NXPH2O95156 264 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 SOX6P35712 828 aa13.27□□□□□ -0.29
CCDC90B-201ENST00000260054 UNC119Q13432 240 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms